SSBD:database

82-Ikeda-GeneExp thumbnail

82-Ikeda-GeneExp

Author reviewed
SSBD:OMERO.gallery SSBD:OMERO
SSBD:downloads
Project name
82-Ikeda-GeneExp
Release date
2018-11-14
Update date
-
Pre-release URL
-
Project title
Immunofluorescence images of different type neural progenitor cells (NPCs)
License
CC BY
Method summary
See details in Ikeda et al. (2018) Nat Commun, 9(1): 605-614.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/29643333
Kind
Image data
Organism
Mus musculus ( NCBITaxon:10090 )
Total
20 files / 70.5 MB
Image datasets
zipped 10 files / 20.1 MB, raw image 10 files / 50.4 MB, total 20 files / 70.5 MB
Quantitative datasets
zipped 0 files / 0 bytes, raw bdml 0 files / 0 bytes, total 0 files / 0 bytes
Image datasets
9
Quantitative datasets
0
Strain
-
Datatype
gene expression
Basedon
Experiment
XYZ-scale
XY: 353 micrometer/pixel, Z: NA
T-scale
-
dblink
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE90034
External links
None
Experiment type
Immunofluorescence
Microscope type
FluorescenceMicroscope
Acquisition mode
WideField
Contrast method
Fluorescence
Microscope model
Olympus IX73
Detector model
Olympus DP73
Objective model
Olympus LUCPlanFL N 40x
Filter set
Olympus IX3-RFACS
Biological Process
gene expression ( GO:0010467 )
Cellular Component
nucleus ( GO:0005634 )
People
Contact
Takashi Ikeda, Keisuke Okita, Shinji Masui
Kyoto University
Department of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA)
Okita Lab
53, Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507 Japan
Contributors
Takashi Ikeda, Takafusa Hikichi, Hisashi Miura, Hirofumi Shibata, Kanae Mitsunaga, Yosuke Yamada, Knut Woltjen, Kei Miyamoto, Ichiro Hiratani, Yasuhiro Yamada, Akitsu Hotta, Takuya Yamamoto, Keisuke Okita, Shinji Masui
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/159/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-159
downloads
https://ssbd.riken.jp/data/82-Ikeda-GeneExp/

Dataset List

Thumbnail
Dataset
Organism
Kind / Links
82-Ikeda-GeneExp/ActbKO1_DAPI thumbnail
ActbKO1_DAPI
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of DAPI staining of Actb kncokout-nueral progenitor cells (NPCs)
82-Ikeda-GeneExp/ActbKO1_MkI1 thumbnail
ActbKO1_MkI1
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of Mkl1 expression of Actb kncokout-nueral progenitor cells (NPCs) using anti-Mkl1 antibody
82-Ikeda-GeneExp/ActbKO1_brightfield thumbnail
ActbKO1_brightfield
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of Actb kncokout-nueral progenitor cells (NPCs)
82-Ikeda-GeneExp/ActbKO2_DAPI thumbnail
ActbKO2_DAPI
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of DAPI staining of Actb kncokout-nueral progenitor cells (NPCs)
82-Ikeda-GeneExp/ActbKO2_MkI1 thumbnail
ActbKO2_MkI1
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of Mkl1 expression of Actb kncokout-nueral progenitor cells (NPCs) using anti-Mkl1 antibody
82-Ikeda-GeneExp/ActbKO2_brightfield thumbnail
ActbKO2_brightfield
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of Actb kncokout-nueral progenitor cells (NPCs)
82-Ikeda-GeneExp/control_DAPI thumbnail
control_DAPI
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of DAPI staining of nueral progenitor cells (NPCs)
82-Ikeda-GeneExp/control_Mkl1 thumbnail
control_Mkl1
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of Mkl1 expression at nueral progenitor cells (NPCs) using anti-Mkl1 antibody
82-Ikeda-GeneExp/control_brightfield thumbnail
control_brightfield
Mus musculus ( NCBITaxon:10090 )
Image data omero.gallery omero
Immunofluorescence images of nueral progenitor cells (NPCs) at the bright field