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SSBD:OMERO
SSBD:BFF
Tools
Ontology validator
Publications
About
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Usage
49-Susaki-MouseBrainCUBIC
Author reviewed
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project name
49-Susaki-MouseBrainCUBIC
Release date
2017-10-03
Update date
2018-11-15
Pre-release URL
-
Project title
-
License
CC BY
Method summary
See details in Susaki et al. (2015) Nature Protocols, 10: 1709–1727.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/26448360
Kind
Image data
Organism
Mus musculus
(
NCBITaxon:10090
)
Total
513 files / 8.5 GB
Image datasets
zipped 1 files / 3.2 GB, raw image 512 files / 5.3 GB, total 513 files / 8.5 GB
Quantitative datasets
zipped 0 files / 0 bytes, raw bdml 0 files / 0 bytes, total 0 files / 0 bytes
Image datasets
1
Quantitative datasets
0
Strain
-
Datatype
organ structure
Basedon
Experiment
XYZ-scale
XY: 6.45 micrometer/pixel, Z: 10 micrometer/frame
T-scale
-
dblink
None
External links
None
Source
http://ssbd.qbic.riken.jp/data/49-Susaki-MouseBrainCUBIC/source/Fig4C_Thy1-YFP-H_Tg.zip
Experiment type
Other
Microscope type
ConfocalMicroscope
Acquisition mode
LaserScanningConfocalMicroscopy
Contrast method
Fluorescence
Microscope model
LaVision Bio Tec Ultramicroscope + Olympus MVX-ZB10
Detector model
Andor sCMOS CCD camera Neo 5.5
Objective model
Olympus MVPLAPO 0.63x/0.15
Filter set
Ultramicroscope filter wheel unit
Biological Process
-
Cellular Component
-
People
Contact
Hiroki R Ueda
RIKEN
Quantitative Biology Center
Laboratory for Synthetic Biology
1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan
Contributors
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Hiroko Yukinaga, Akihiro Kuno, Hiroki R Ueda
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/105/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-105
downloads
https://ssbd.riken.jp/data/49-Susaki-MouseBrainCUBIC/
Dataset List
Thumbnail
Dataset
Organism
Kind / Links
Fig4C_Thy1-YFP-H_Tg
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Light-sheet fluorescence microscopy (LSFM) images of Thy1-YFP-H Arc-dVenus transgenic (Tg) mouse brain