SSBD:database

41-Hirata-XChrHiC

Author reviewed
SSBD:downloads
Project name
41-Hirata-XChrHiC
Release date
2017-10-03
Update date
2018-11-15
Pre-release URL
-
Project title
-
License
CC BY-NC-SA
Method summary
See details in Hirata et al. (2016) Scientific Reports, 6: 34982.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/27725694
Kind
Quantitative data
Organism
Mus musculus ( NCBITaxon:10090 )
Total
33 files / 4.1 MB
Image datasets
zipped 0 files / 0 bytes, raw image 0 files / 0 bytes, total 0 files / 0 bytes
Quantitative datasets
zipped 11 files / 209.3 KB, raw bdml 22 files / 3.9 MB, total 33 files / 4.1 MB
Image datasets
0
Quantitative datasets
11
Strain
-
Datatype
chromosome structure
Basedon
Experiment
XYZ-scale
XYZ: 1 a.u.
T-scale
-
dblink
None
External links
None
Experiment type
Other
Microscope type
Other
Acquisition mode
Other
Contrast method
Other
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Biological Process
-
Cellular Component
-
People
Contact
Yoshito Hirata
University of Tokyo
Institute of Industrial Science
-
4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
Contributors
Yoshito Hirata, Arisa Oda, Kunihiro Ohta, Kazuyuki Aihara
downloads
https://ssbd.riken.jp/data/41-Hirata-XChrHiC/

Dataset List

Thumbnail
Dataset
Organism
Kind / Links
Fig4c_C1
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #1
Fig4c_C2
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #2
Fig4c_C3
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #3
Fig4c_E
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from an ensemble (multi-cellular/population) Hi-C data at 250-kb resolution for male mouse T helper (TH1) cells
FigS2_C10
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #10
FigS2_C4
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #4
FigS2_C5
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #5
FigS2_C6
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #6
FigS2_C7
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #7
FigS2_C8
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #8
FigS2_C9
Mus musculus ( NCBITaxon:10090 )
Quantitative data BDML
BDML file for quantiative information about X chromosome structure from Hi-C data at 250-kb resolution for a male mouse T helper (TH1) cell #9