SSBD:database

2-Kyoda-WormEmbryoRNAi thumbnail

2-Kyoda-WormEmbryoRNAi

Author reviewed
SSBD:OMERO.gallery SSBD:OMERO
SSBD:downloads
Project name
2-Kyoda-WormEmbryoRNAi
Release date
2013-09-02
Update date
2020-02-03
Pre-release URL
-
Project title
-
License
CC BY-SA
Method summary
See details in Kyoda et al. (2013) Nucleic Acids Res 41, D732-D737
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/23172286
Kind
Image data
Quantitative data
Organism
Caenorhabditis elegans ( NCBITaxon:6239 )
Total
34544 files / 3.1 TB
Image datasets
zipped 326 files / 1.5 TB, raw image 33660 files / 1.5 TB, total 33986 files / 3.0 TB
Quantitative datasets
zipped 186 files / 4.9 GB, raw bdml 372 files / 136.1 GB, total 558 files / 141.0 GB
Image datasets
25
Quantitative datasets
25
Strain
-
Datatype
nuclear division dynamics
Basedon
Experiment
XYZ-scale
XY: 0.105 micrometer/pixel, Z: 0.5 micrometer/slice
T-scale
40 second for each time interval
dblink
http://so.qbic.riken.jp/wddd/
External links
None
PDPML
http://ssbd.qbic.riken.jp/data/pdpml/2-Kyoda-WormEmbryoRNAi_pdpml1.0.xml
Experiment type
TimeLapse
Microscope type
DifferentInterferenceContrastMicroscope
Acquisition mode
-
Contrast method
DIC
Microscope model
Leica DMRE
Detector model
Hamamatsu Photonics ORCA C4742-95
Objective model
Leica HCX PL Apo 100x/1.40 O
Filter set
-
Biological Process
embryo development ( GO:0009790 )
Cellular Component
nucleus ( GO:0005634 )
People
Contact
Shuichi Onami
RIKEN
Quantitative Biology Center
Laboratory for Developmental Dynamics
2-2-3, Minatojima-minamimachi, Chuo-ku, Kobe 650-0047 Japan
Contributors
Eru Adachi, Eriko Masuda, Yoko Nagai, Yoko Suzuki, Taeko Oguro, Koji Kyoda, Shuichi Onami
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/1/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-1
downloads
https://ssbd.riken.jp/data/2-Kyoda-WormEmbryoRNAi/

Dataset List

Thumbnail
Dataset
Organism
Kind / Links
2-Kyoda-WormEmbryoRNAi/RNAi_B0336.10_040518_01 thumbnail
RNAi_B0336.10_040518_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0336.10(RNAi) embryo (rpl-23(RNAi) embryo)
RNAi_B0336.10_040518_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0336.10(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_B0336.10_040518_02 thumbnail
RNAi_B0336.10_040518_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0336.10(RNAi) embryo (rpl-23(RNAi) embryo)
RNAi_B0336.10_040518_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0336.10(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_B0361.10_040518_01 thumbnail
RNAi_B0361.10_040518_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0361.10(RNAi) embryo (ykt-6(RNAi) embryo)
RNAi_B0361.10_040518_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0361.10(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_B0361.10_070828_01 thumbnail
RNAi_B0361.10_070828_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0361.10(RNAi) embryo (ykt-6(RNAi) embryo)
RNAi_B0361.10_070828_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0361.10(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_B0464.7_040518_02 thumbnail
RNAi_B0464.7_040518_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0464.7(RNAi) embryo (baf-1(RNAi) embryo)
RNAi_B0464.7_040518_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0464.7(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_B0464.7_070605_01 thumbnail
RNAi_B0464.7_070605_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in B0464.7(RNAi) embryo (baf-1(RNAi) embryo)
RNAi_B0464.7_070605_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of B0464.7(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C02F5.1_061219_02 thumbnail
RNAi_C02F5.1_061219_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C02F5.1(RNAi) embryo (knl-1(RNAi) embryo)
RNAi_C02F5.1_061219_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C02F5.1(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C02F5.9_040608_01 thumbnail
RNAi_C02F5.9_040608_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C02F5.9(RNAi) embryo (pbs-6(RNAi) embryo)
RNAi_C02F5.9_040608_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C02F5.9(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C02F5.9_070607_03 thumbnail
RNAi_C02F5.9_070607_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C02F5.9(RNAi) embryo (pbs-6(RNAi) embryo)
RNAi_C02F5.9_070607_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C02F5.9(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C03C10.3_061031_01 thumbnail
RNAi_C03C10.3_061031_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C03C10.3(RNAi) embryo (rnr-2(RNAi) embryo)
RNAi_C03C10.3_061031_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C03C10.3(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C05D11.11_040601_02 thumbnail
RNAi_C05D11.11_040601_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C05D11.11(RNAi) embryo (mel-32(RNAi) embryo)
RNAi_C05D11.11_040601_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C05D11.11(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C05D11.11_070612_02 thumbnail
RNAi_C05D11.11_070612_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C05D11.11(RNAi) embryo (mel-32(RNAi) embryo)
RNAi_C05D11.11_070612_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C05D11.11(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C05D11.11_070612_03 thumbnail
RNAi_C05D11.11_070612_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C05D11.11(RNAi) embryo (mel-32(RNAi) embryo)
RNAi_C05D11.11_070612_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C05D11.11(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C05D11.3_040603_02 thumbnail
RNAi_C05D11.3_040603_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C05D11.3(RNAi) embryo (tag-170(RNAi) embryo)
RNAi_C05D11.3_040603_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C05D11.3(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C07A9.2_040615_02 thumbnail
RNAi_C07A9.2_040615_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C07A9.2(RNAi) embryo
RNAi_C07A9.2_040615_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C07A9.2(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C07A9.2_071003_02 thumbnail
RNAi_C07A9.2_071003_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C07A9.2(RNAi) embryo
RNAi_C07A9.2_071003_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C07A9.2(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C07A9.3_040617_01 thumbnail
RNAi_C07A9.3_040617_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C07A9.3(RNAi) embryo (tlk-1(RNAi) embryo)
RNAi_C07A9.3_040617_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C07A9.3(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C07A9.3_040617_02 thumbnail
RNAi_C07A9.3_040617_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C07A9.3(RNAi) embryo (tlk-1(RNAi) embryo)
RNAi_C07A9.3_040617_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C07A9.3(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C16C10.6_040622_01 thumbnail
RNAi_C16C10.6_040622_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C16C10.6(RNAi) embryo (ccdc-55(RNAi) embryo)
RNAi_C16C10.6_040622_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C16C10.6(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C16C10.6_040622_02 thumbnail
RNAi_C16C10.6_040622_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C16C10.6(RNAi) embryo (ccdc-55(RNAi) embryo)
RNAi_C16C10.6_040622_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C16C10.6(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C23G10.8_040525_02 thumbnail
RNAi_C23G10.8_040525_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C23G10.8(RNAi) embryo
RNAi_C23G10.8_040525_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C23G10.8(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C23G10.8_040525_03 thumbnail
RNAi_C23G10.8_040525_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C23G10.8(RNAi) embryo
RNAi_C23G10.8_040525_03
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C23G10.8(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C26E6.4_040601_01 thumbnail
RNAi_C26E6.4_040601_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C26E6.4(RNAi) embryo (rpb-2(RNAi) embryo)
RNAi_C26E6.4_040601_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C26E6.4(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C26E6.4_040601_02 thumbnail
RNAi_C26E6.4_040601_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C26E6.4(RNAi) embryo (rpb-2(RNAi) embryo)
RNAi_C26E6.4_040601_02
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C26E6.4(RNAi) embryo
2-Kyoda-WormEmbryoRNAi/RNAi_C29E4.8_040610_01 thumbnail
RNAi_C29E4.8_040610_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Image data omero.gallery omero
3D time-lapse microscopy images about nuclear division dynamics in C29E4.8(RNAi) embryo (let-754(RNAi) embryo)
RNAi_C29E4.8_040610_01
Caenorhabditis elegans ( NCBITaxon:6239 )
Quantitative data BDML
BDML file for quantitative information about nuclear division dynamics of C29E4.8(RNAi) embryo