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Resources in SSBD:database (metadata v3)
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SSBD:OMERO
SSBD:BFF
Tools
Ontology validator
Publications
About
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Copyright
Usage
15-Harima-GeneExp
Author reviewed
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project name
15-Harima-GeneExp
Release date
2016-01-18
Update date
2018-11-15
Pre-release URL
-
Project title
-
License
CC BY-NC-SA
Method summary
See details in Harima et al. (2013) Cell Reports, 3(1): 1-7
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/23219549
Kind
Image data
Quantitative data
Organism
Mus musculus
(
NCBITaxon:10090
)
Total
10 files / 1.4 MB
Image datasets
zipped 2 files / 314.0 KB, raw image 2 files / 398.0 KB, total 4 files / 712.0 KB
Quantitative datasets
zipped 2 files / 30.8 KB, raw bdml 4 files / 649.2 KB, total 6 files / 680.1 KB
Image datasets
2
Quantitative datasets
2
Strain
-
Datatype
gene expression data
Basedon
Experiment
XYZ-scale
-
T-scale
5 minute for each time interval
dblink
None
External links
None
PDPML
http://ssbd.qbic.riken.jp/data/pdpml/15-Harima-GeneExp_pdpml1.0.xml
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Biological Process
-
Cellular Component
-
People
Contact
Ryoichiro Kageyama
Kyoto University
Institute for Virus Research
Kageyama Laboratory
Shogoin-Kawahara, Sakyo-ku, Kyoto, 606-8507, Japan
Contributors
Yukiko Harima, Yoshiki Takashima, Yuriko Ueda, Toshiyuki Ohtsuka, and Ryoichiro Kageyama
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/3/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-3
downloads
https://ssbd.riken.jp/data/15-Harima-GeneExp/
Dataset List
Thumbnail
Dataset
Organism
Kind / Links
ct_Mmu_PSM
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Hes7 reporter expression dynamics in the presomitic mesoderm (PSM) of M. musculus control embryo
ct_Mmu_PSM
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file of Hes7 reporter expression dynamics in the presomitic mesoderm (PSM) of M. musculus control embryo
mu_Mmu_PSM
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Hes7 reporter expression dynamics in the presomitic mesoderm (PSM) of M. musculus pH7-Hes7-3 embryo
mu_Mmu_PSM
Mus musculus
(
NCBITaxon:10090
)
Quantitative data
BDML
BDML file of Hes7 reporter expression dynamics in the presomitic mesoderm (PSM) of M. musculus control embryo