SSBD
:database
Share your data
SSBD:repository
SSBD:database
Resources
Resources in SSBD:database (metadata v3)
Resources in SSBD:database
Resources in SSBD:repository
SSBD:OMERO
SSBD:BFF
Tools
Ontology validator
Publications
About
About SSBD
Statistics
About us
News
Copyright
Usage
141-Sato-CellMorphology
Author reviewed
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project name
141-Sato-CellMorphology
Release date
2019-11-20
Update date
-
Pre-release URL
-
Project title
FIB-SEM images of spine synapses morphology in spectrum disorder (ASD) model mice with human 15q11-13 chromosomal duplication (15q dup mice)
License
CC BY
Method summary
See details in Sato et al. (2019) Microscopy (Oxf), 68(2): 122-132.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/30371805
Kind
Image data
Organism
Mus musculus
(
NCBITaxon:10090
)
Total
34 files / 99.3 MB
Image datasets
zipped 17 files / 48.3 MB, raw image 17 files / 51.1 MB, total 34 files / 99.3 MB
Quantitative datasets
zipped 0 files / 0 bytes, raw bdml 0 files / 0 bytes, total 0 files / 0 bytes
Image datasets
17
Quantitative datasets
0
Strain
-
Datatype
synapse morphology
Basedon
Experiment
XYZ-scale
XY: 5.58 nanometre/pixel; Z:NA
T-scale
-
dblink
None
External links
None
Experiment type
Other
Microscope type
Other
Acquisition mode
Other
Contrast method
Other
Microscope model
ZEISS CrossBeam 540
Detector model
-
Objective model
-
Filter set
-
Biological Process
-
Cellular Component
neuron spine (
GO:0044309
) , spine synapse (
GO:0106033
)
People
Contact
Shigeo Okabe
Graduate School of Medicine, University of Tokyo
Department of Cellular Neurobiology
Okabe Laboratory
7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033 Japan
Contributors
Yuka Sato, Shigeo Okabe
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/451/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-451
downloads
https://ssbd.riken.jp/data/141-Sato-CellMorphology/
Dataset List
Thumbnail
Dataset
Organism
Kind / Links
Fig1a_FIB-SEM_somatosensory
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM image of the somatosensory cortex in wild-type (C57BL/6J) mice
Fig2a_FIB-SEM_spine_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of spine synapse profiles in wild-type (C57BL/6J) mice
Fig2b_FIB-SEM_spine_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of spine synapse profiles in wild-type (C57BL/6J) mice
Fig2c_FIB-SEM_spine_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of spine synapse profiles in wild-type (C57BL/6J) mice
Fig2d_FIB-SEM_spine_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of spine synapse profiles in wild-type (C57BL/6J) mice
Fig2e_FIB-SEM_shaft_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of shaft synapse profiles in wild-type (C57BL/6J) mice
Fig2f_FIB-SEM_shaft_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of shaft synapse profiles in wild-type (C57BL/6J) mice
Fig2g_FIB-SEM_shaft_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of shaft synapse profiles in wild-type (C57BL/6J) mice
Fig2h_FIB-SEM_shaft_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
FIB-SEM image of shaft synapse profiles in wild-type (C57BL/6J) mice
Fig3a_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of spine synapse in wild-type (C57BL/6J) mice
Fig3b_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of shaft synapses in wild-type (C57BL/6J) mice
Fig3c_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of spine synapse in spectrum disorder (ASD) model mice with human 15q11-13 chromosomal duplication (15q dup mice)
Fig3d_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of shaft synapses in spectrum disorder (ASD) model mice with human 15q11-13 chromosomal duplication (15q dup mice)
Fig3i_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of spine synapse in wild-type (C57BL/6J) mice
Fig3j_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of shaft synapses in wild-type (C57BL/6J) mice
Fig3k_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of spine synapse in spectrum disorder (ASD) model mice with human 15q11-13 chromosomal duplication (15q dup mice)
Fig3l_FIB-SEM_synapse
Mus musculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
Single FIB-SEM images of shaft synapses in spectrum disorder (ASD) model mice with human 15q11-13 chromosomal duplication (15q dup mice)