SSBD:database

Project name

Release date

2018-11-14

Update date

-

Pre-release URL

None

Project title

HE staining images of human and mouse organs with CUBIC

Contact name

Hiroki R. Ueda

Organization

RIKEN

Department

Center for Biosystems Dynamics Research

Laboratory

Laboratory for Synthetic Biology

License

CC BY

Contributors

Satoshi Nojima, Etsuo A. Susaki, Kyotaro Yoshida, Hiroyoshi Takemoto, Naoto Tsujimura, Shohei Iijima, Ko Takachi, Yujiro Nakahara, Shinichiro Tahara, Kenji Ohshima, Masako Kurashige, Yumiko Hori, Naoki Wada, Jun-ichiro Ikeda, Atsushi Kumanogoh, Eiichi Morii, Hiroki R. Ueda

Method summary

See details in Nojima et al. (2017) Sci Rep, 7(1): 9269.

File or Folder

humanLN_CD3_d7

Kind

Image data

Title

Immunohistochemistry image of human lymph nodes using makers of CD3 with CUBIC at day 7

Description

-

Organism

Homo sapiens ( NCBITaxon:9606 )

Strain

None

Datatype

cell morphology

Basedon

Experiment

LocalID

humanLN_CD3_d7

XYZ-scale

XY: 0.55 micrometer/pixel, Z: NA

T-scale

None

dblink

None

External links

-

Source

None

BDML

None

PDPML

None

Experiment type

Immunocytochemistry

Microscope type

ConfocalMicroscope

Acquisition mode

BrightField

Contrast method

Brightfield

Microscope model

Carl-Zeiss Zeiss LSM710

Detector model

None

Objective model

None

Filter set

None

Sample

-

Dye

-

Clearing

-

Biological Process

lung growth ( GO:0060437 ) , lymph node development ( GO:0048535 )

Cellular Component

-