SSBD:database

Dataset 20-Azuma-WormMembrane/Membrane

Author reviewed
SSBD:OMERO.gallery (Project) SSBD:OMERO (Project) BDML 4D Viewer
SSBD:downloads
Project name
20-Azuma-WormMembrane
Release date
2017-03-01
Update date
2017-11-15
Pre-release URL
http://ssbd.qbic.riken.jp/set/20170301/
Project title
A set of BDML file for digitized cellular dynamics of a C. elegans embryo
Contact name
Shuichi Onami
Organization
RIKEN
Department
Quantitative Biology Center
Laboratory
Laboratory for Developmental Dynamics
Address
2-2-3, Minatojima-minamimachi, Chuo-ku, Kobe 650-0047 Japan
License
CC BY-NC-SA
Contributors
Yusuke Azuma, Shuichi Onami
Method summary
See details in Azuma & Onami et al. (2017) BMC Bioinformatics, 18(1): 307.
PubMed URL
https://www.ncbi.nlm.nih.gov/pubmed/28629355
File or Folder
Membrane
Kind
Image data
Title
BDML file for digitized cellular dynamics of a C. elegans embryo
Description
-
Organism
Caenorhabditis elegans ( NCBITaxon:6239 )
Strain
None
Datatype
cellular dynamics
Basedon
Experiment
LocalID
Membrane
XYZ-scale
XY: 0.444 micrometer/pixel, Z: 0.500 micrometer/frame
T-scale
None
dblink
None
External links
-
Source
None
BDML
None
PDPML
None
Experiment type
TimeLapse
Microscope type
ConfocalMicroscope
Acquisition mode
Other
Contrast method
Other
Microscope model
None
Detector model
None
Objective model
None
Filter set
None
Sample
-
Dye
-
Clearing
-
Note0
-
Biological Process
embryo development ( GO:0009790 )
Cellular Component
membrane ( GO:0016020 )
Project gallery
https://ssbd.riken.jp/omero/gallery/show_project/101/
Project
https://ssbd.riken.jp/omero/webclient/?show=project-101
Documents
BDML file of digitized cellular dynamics of a C. elegans embryo
4D Viewer
https://ssbd.riken.jp/webbd5viewer/viewerBD5.html?project=20-Azuma-WormMembrane&file=Membrane_bd5

Sibling records

Image data
Membrane
Time-lapse microscopy images of cellular dynamics of a C. elegans embryo
downloads
https://ssbd.riken.jp/data/20-Azuma-WormMembrane/