Summary of ssbd-repos-000258

SSBD:database
URL

Name
ssbd-repos-000258 (258-Oginuma-EmbryoDev)
URL
DOI
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Title
Time-lapse imaging of hba reporter expression in the GFP knock-in N. furzeri embryos.
Description
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Submited Date
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Release Date
2023-05-11
Updated Date
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License
Funding information
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File formats
Data size
50.0 MB

Organism
Nothobranchius furzeri
Strain
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Cell Line
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Genes
hba
Proteins
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GO Molecular Function (MF)
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GO Biological Process (BP)
CRISPR-cas system
GO Cellular Component (CC)
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Study Type
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Imaging Methods
time lapse microscopy

Method Summary
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Related paper(s)

Masayuki Oginuma, Moana Nishida, Tomomi Ohmura-Adachi, Kota Abe, Shohei Ogamino, Chihiro Mogi, Hideaki Matsui, Tohru Ishitani (2022) Rapid reverse genetics systems for Nothobranchius furzeri, a suitable model organism to study vertebrate aging., Scientific reports, Volume 12, Number 1, pp. 11628

Published in 2022 Jul 8 (Electronic publication in July 8, 2022, midnight )

(Abstract) The African turquoise killifish Nothobranchius furzeri (N. furzeri) is a useful model organism for studying aging, age-related diseases, and embryonic diapause. CRISPR/Cas9-mediated gene knockout and Tol2 transposon-mediated transgenesis in N. furzeri have been reported previously. However, these methods take time to generate knockout and transgenic fish. In addition, knock-in technology that inserts large DNA fragments as fluorescent reporter constructs into the target gene in N. furzeri has not yet been established. Here, we show that triple-target CRISPR-mediated single gene disruption efficiently produces whole-body biallelic knockout and enables the examination of gene function in the F0 generation. In addition, we developed a method for creating the knock-in reporter N. furzeri without crossing by optimizing the CRISPR/Cas9 system. These methods drastically reduce the duration of experiments, and we think that these advances will accelerate aging and developmental studies using N. furzeri.
(MeSH Terms)

Contact(s)
Tohru Ishitani
Organization(s)
Osaka University , Research Institute for Microbial Diseases , Division of Cellular and Molecular Biology, Department of Homeostatic Regulation
Image Data Contributors
Quantitative Data Contributors

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