Summary of ssbd-repos-000229

SSBD:database
URL

Name
ssbd-repos-000229 (229-Yamada-GeneExpression)
URL
DOI
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Title
Time-lapse images of light inducible PA-Gal4cc activity in mouse brain or HEK293T cells
Description
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Submited Date
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Release Date
2022-11-23
Updated Date
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License
Funding information
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File formats
Data size
1.8 GB

Organism
Mus musculus, Homo sapiens
Strain
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Cell Line
HEK293T
Genes
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Proteins
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GO Molecular Function (MF)
translation activator activity
GO Biological Process (BP)
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GO Cellular Component (CC)
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Study Type
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Imaging Methods
time lapse microscopy

Method Summary
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Related paper(s)

Mayumi Yamada, Shinji C Nagasaki, Yusuke Suzuki, Yukinori Hirano, Itaru Imayoshi (2020) Optimization of Light-Inducible Gal4/UAS Gene Expression System in Mammalian Cells., iScience, Volume 23, Number 9, pp. 101506

Published in 2020 Aug 27 (Electronic publication in Aug. 27, 2020, midnight )

(Abstract) Light-inducible gene expression systems represent powerful methods for studying the functional roles of dynamic gene expression. Here, we developed an optimized light-inducible Gal4/UAS gene expression system for mammalian cells. We designed photoactivatable (PA)-Gal4 transcriptional activators based on the concept of split transcription factors, in which light-dependent interactions between Cry2-CIB1 PA-protein interaction modules can reconstitute a split Gal4 DNA-binding domain and p65 transcription activation domain. We developed a set of PA-Gal4 transcriptional activators (PA-Gal4cc), which differ in terms of induced gene expression levels following pulsed or prolonged light exposure, and which have different activation/deactivation kinetics. These systems offer optogenetic tools for the precise manipulation of gene expression at fine spatiotemporal resolution in mammalian cells.

Contact(s)
Itaru Imayoshi
Organization(s)
kyoto University , Graduate School of Biostudies , Research Center for Dynamic Living Systems
Image Data Contributors
Quantitative Data Contributors

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