ssbd-repos-000522

Confocal fluorescence images of newly synthesized proteins labeled with TAMRA-DBCO or SiR-DBCO and their degradation dynamics
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Name
ssbd-repos-000522
URL
DOI

Project metadata

Title
Confocal fluorescence images of newly synthesized proteins labeled with TAMRA-DBCO or SiR-DBCO and their degradation dynamics
Description
We synthesized orange-emitting tetramethylrhodamine (TAMRA)-DBCO and far-red-emitting silicon rhodamine (SiR)-DBCO. TAMRA-DBCO enabled the visualization of newly synthesized proteins and their time-dependent degradation throughout the entire cell. SiR-DBCO was similarly effective, but was mainly distributed to the cytoplasm. The time-dependent decrease of TAMRA-DBCO fluorescence intensity in living cells was suppressed by lysosomal enzyme inhibitors and a proteasome inhibitor, suggesting that newly synthesized proteins are degraded via both pathways. Moreover, imaging of drug-induced senescent cells with TAMRA-DBCO suggested that senescent cells have a lower protein degradation ability than non-senescent cells.
Submission date
2026-07-22
Release date
2026-07-28
Update date
-
License
Funding information
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File formats
.oir

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Data (repos)
173 files / 1.60 GiB
Bundle (zip)
5 files / 550.36 MiB

Related paper(s)

Persons

Name
Kenjiro Hanaoka
Contact
Name
Shun Sumitani
Imaging contributor, Quantitative data contributor

Ontology terms

Organism
Homo sapiens
Strain
-
Cell line
HeLa cell
Molecular function
-
Biological process
-
Cellular component
-
Medical subject heading
-
Biological imaging method
Confocal laser microscopy

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