ssbd-repos-000416

descSPIM: an affordable and easy-to-build light-sheet microscope optimized for tissue clearing techniques
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ssbd-repos-000416
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Title
descSPIM: an affordable and easy-to-build light-sheet microscope optimized for tissue clearing techniques
Description
Despite widespread adoption of tissue clearing techniques in recent years, poor access to suitable light-sheet fluorescence microscopes remains a major obstacle for biomedical end-users. Here, we present descSPIM (desktop- equipped SPIM for cleared specimens), a low-cost ($20,000–50,000), low- expertise (one-day installation by a non-expert), yet practical do-it-yourself light-sheet microscope as a solution for this bottleneck. Even the most fundamental configuration of descSPIM enables multi-color imaging of whole mouse brains and a cancer cell line-derived xenograft tumor mass for the visualization of neurocircuitry, assessment of drug distribution, and pathological examination by false-colored hematoxylin and eosin staining in a three- dimensional manner. Academically open-sourced (https://github.com/dbsb- juntendo/descSPIM), descSPIM allows routine three-dimensional imaging of cleared samples in minutes. Thus, the dissemination of descSPIM will accelerate biomedical discoveries driven by tissue clearing technologies.
Submission date
2025-05-07
Release date
2025-05-08
Update date
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51 files / 348.60 GiB
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4 files / 35.33 GiB

Related paper(s)

Persons

Name
Etsuo A Susaki
Contact
Name
Kohei Otomo
Imaging contributor
Name
Takaki Omura
Imaging contributor

Ontology terms

Organism
Mus musculus (NCBI:txid10090), Homo sapiens (NCBI:txid9606)
Strain
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Cell line
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Molecular function
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Biological process
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Cellular component
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Medical subject heading
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Biological imaging method
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