ssbd-repos-000341

Dataset for "Live-cell fluorescence imaging and optogenetic control of PKA kinase activity in fission yeast Schizosaccharomyces pombe."
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Name
ssbd-repos-000341
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DOI

Project metadata

Title
Dataset for "Live-cell fluorescence imaging and optogenetic control of PKA kinase activity in fission yeast Schizosaccharomyces pombe."
Description
The cAMP-PKA signaling pathway plays a crucial role in sensing and responding to nutrient availability in the fission yeast Schizosaccharomyces pombe. This pathway monitors external glucose levels to control cell growth and sexual differentiation. However, the temporal dynamics of the cAMP-PKA pathway in response to external stimuli remains unclear mainly due to the lack of tools to quantitatively visualize the activity of the pathway. Here, we report the development of the kinase translocation reporter (KTR)-based biosensor spPKA-KTR1.0, which allows us to measure the dynamics of PKA activity in fission yeast cells. The spPKA-KTR1.0 is derived from the transcription factor Rst2, which translocates from the nucleus to the cytoplasm upon PKA activation. We found that spPKA-KTR1.0 translocates between the nucleus and cytoplasm in a cAMP-PKA pathway-dependent manner, indicating that the spPKA-KTR1.0 is a reliable indicator of the PKA activity in fission yeast cells. In addition, we implemented a system that simultaneously visualizes and manipulates the cAMP-PKA signaling dynamics by introducing bPAC, a photoactivatable adenylate cyclase, in combination with spPKA-KTR1.0. This system offers an opportunity for investigating the role of the signaling dynamics of the cAMP-PKA pathway in fission yeast cells with higher temporal resolution. All imaging raw data and quantifications are available in the dataset.
Submission date
2024-02-16
Release date
2024-04-08
Update date
-
License
Funding information
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File formats
Tiff

Storage

Data (repos)
31,006 files / 84.28 GiB
Bundle (zip)
13 files / 30.19 GiB

Related paper(s)

Persons

Name
Yuhei Goto
Contact
Name
Keiichiro Sakai
Imaging contributor
Name
Keiichiro Sakai
Quantitative data contributor

Ontology terms

Organism
Schizosaccharomyces pombe
Strain
See details in Sakai et al., bioRxiv, 2024
Cell line
-
Molecular function
-
Biological process
-
Cellular component
-
Medical subject heading
-
Biological imaging method
-

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