ssbd-repos-000216

Imaging dataset for "LIM Tracker: a software package for cell tracking and analysis with advanced interactivity."
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Name
ssbd-repos-000216
URL
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Project metadata

Title
Imaging dataset for "LIM Tracker: a software package for cell tracking and analysis with advanced interactivity."
Description
We introduce our cell tracking software “LIM Tracker”. This software has a conventional tracking function consisting of recognition processing and link processing, a sequential search-type tracking function based on pattern matching, and a manual tracking function. LIM Tracker enables the seamless use of these functions. In addition, the system incorporates a highly interactive and interlocking data visualization method, which displays analysis result in real time, making it possible to flexibly correct the data and reduce the burden of tracking work. Moreover, recognition functions with deep learning (DL) are also available, which can be used for a wide range of targets including stain-free images. LIM Tracker allows researchers to track living objects with good usability and high versatility for various targets. We present a tracking case study based on fluorescence microscopy images (NRK-52E/EKAREV-NLS cells or MCF-10A/H2B-iRFP-P2A-mScarlet-I-hGem-P2A-PIP-NLS-mNeonGreen cells).
Submission date
2021-11-26
Release date
-
Update date
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Funding information
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File formats
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2 files / 678.07 MiB
Bundle (zip)
2 files / 379.97 MiB

Related paper(s)

Persons

Name
Hideya Aragaki
Contact
Name
Kazuhiro Aoki
Imaging contributor
Name
Kazuhiro Aoki
Imaging contributor
Name
Hideya Aragaki
Quantitative data contributor

Ontology terms

Organism
NRK-52E/EKAREV-NLS, MCF-10A/H2B-iRFP-P2A-mScarlet-I-hGem-P2A-PIP-NLS-mNeonGreen
Strain
-
Cell line
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Molecular function
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Biological process
-
Cellular component
-
Medical subject heading
-
Biological imaging method
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