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127-Konishi-ERKDyn
Author reviewed
Live-Cell FRET images and BDML quantitative information about extracellular signal-regulated kinase activity dynamics in thymocyte motility
Zallery
SSBD:OMERO.gallery
SSBD:OMERO
SSBD:downloads
Project ID
127-Konishi-ERKDyn
Project DOI
-
Title
Live-Cell FRET images and BDML quantitative information about extracellular signal-regulated kinase activity dynamics in thymocyte motility
Description
-
Release Date
2021-09-30
Update Date
-
License
CC BY
Version
1.0.0
Method Summary
See details in Konishi Y, et. al. (2018) iScience, 10: 98-113.
Kind
Image data
Total
310296 files / 42.4 GB
Image datasets
zipped 143 files / 16.0 GB, raw image 310153 files / 26.4 GB, total 310296 files / 42.4 GB
Quantitative datasets
zipped 0 files / 0 bytes, raw bdml 0 files / 0 bytes, total 0 files / 0 bytes
Paper(s)
Organism
Mus muculus
(
NCBITaxon:10090
)
Strain
-
Cell line
-
Biological Process
activation of MAPERK kinase (
GO:0000186
)
cell motility (
GO:0048870
)
Cellular Component
T cell receptor complex (
GO:0042101
)
Medical Subject Headings
-
Method involved in biological imaging
fluorescence microscopy (
FBbi:00000246
)
time lapse microscopy (
FBbi:00000249
)
Image datasets
143
Quantitative datasets
0
OMERO.gallery
https://ssbd.riken.jp/omero/gallery/show_project/653/
OMERO
https://ssbd.riken.jp/omero/webclient/?show=project-653
Zallery
https://openssbd.github.io/zallery/#/study/ssbd-database-000127
downloads
https://ssbd.riken.jp/data/127-Konishi-ERKDyn/
People
Contact
Kenta Terai
Kyoto University
Graduate School of Biostudies
Laboratory of Bioimaging and Cell Signaling
Imaging dataset contributor
-
Quantitative dataset contributor
Kenta Terai (Kyoto University)
Yoshinobu Konishi (Kyoto University)
Datasets
Previous
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Thumbnail
Dataset
Organism
Kind / Links
Fig3G_invivo_DP_cortex5_partial
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes overlaid on the sliced thymic lobes
Fig3G_invivo_DP_cortex5_timelapse2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes overlaid on the sliced thymic lobes
Fig5C_control_WT_onWT1z
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the motility of DP (CD4/CD8 double-positive) thymocytes in the cortex without MEKi pretreatmen
Fig5DF_control_DP_cortex5_partial
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the motility of DP (CD4/CD8 double-positive) thymocytes in the cortex without MEKi pretreatmen
Fig6AC_DP_cortex5_partial
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Timelpase fluorescence images of the motility of DP (CD4/CD8 double-positive) thymocytes
Figure1C_Eisuke_intestin
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the intestin of Eisuke mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1C_Eisuke_liver
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the liver of Eisuke mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1C_Eisuke_lymph
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the lymph of Eisuke mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1C_Ella_ERKnes_Lymph
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the lymph of EIIa-EKAREV-NES mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1C_Ella_ERKnes_intestin
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the intestin of EIIa-EKAREV-NES mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1C_Ella_ERKnes_liver
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of EKAREV distribution in the liver of EIIa-EKAREV-NES mouse through a BA 520-560 nm fileter shown in grayscale.
Figure1F_ERK_pre2_2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence image of T cells of the lymph node in a living mouse obtained by TPEM through a BA 520-560 nm emission filter
Figure1G_ERK_CD3_administration60min
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
A fluorescence images of the T cells in the paracortex was injected with anti-CD3 antibody intravenously for 60 minutes
Figure1G_ERK_MEKi
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Timelapse fluorescence images of the T cells in the paracortex was injected with MEK inhibitor intravenously
Figure1G_ERK_Pre_administration
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Timelapse fluorescence images of the T cells in the paracortex before administration with anti-CD3 antibody
Figure2B_Thymic_Cortex
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
Fluorescence images of the thymic cortex of Lck-EKAREV-NLS mouse through a BA 520-560nm emission filter
Figure2CD_Thymic_Cortex_OT
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
Fluorescence images of ERK activity of the OT-I TCR (ovalbumin(OVA)-specific TCR transgenic mice ) thmocytes in the cortex showing in intesity-modulated display mode
Figure2CD_Thymic_Cortex_WT
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
Fluorescence images of ERK activity of the WT(Lck-EKAREV-NLS ) thmocytes in the cortex showing in intesity-modulated display mode
Figure3BC_cortex_medulla
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence image of thymic lobes showing both thymocytes (BA 520-560 nm emission filter) and thymic DCs (BA 615-675 nm emission filter)
Figure3D_cortex
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the cortex in intesity-modulated display mode
Figure3D_medulla
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the medulla in intesity-modulated display mode
Figure3E_cortex_0421_1
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in cortex
Figure3E_cortex_0421_2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in cortex
Figure3E_cortex_0422
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in cortex
Figure3E_cortex_0513
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in cortex
Figure3E_medulla_170401
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in medulla
Figure3E_medulla_170422
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in medulla
Figure3E_medulla_170513
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity in medulla
Figure3G_invitro_N1_CD4_extracted
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes in vitro
Figure3G_invitro_N1_CD8_true1
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N1_CD8_true2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N1_CD8_true3
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N1_DP
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invitro_N1_DPture
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invitro_N2_CD4
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes in vitro
Figure3G_invitro_N2_CD8
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N2_DP
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invitro_N2_DP_ture
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invitro_N3_CD4
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes in vitro
Figure3G_invitro_N3_CD4_2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes in vitro
Figure3G_invitro_N3_CD4_3
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes in vitro
Figure3G_invitro_N3_CD8
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N3_CD8_2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N3_CD8_3
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N3_CD8_4
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N3_CD8_5
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD8 thymocytes in vitro
Figure3G_invitro_N3_DP
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invitro_N3_DP_2
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated DP (CD4/CD8 double-positive) thymocytes in vitro
Figure3G_invivo_CD4_0522
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes overlaid on the sliced thymic lobes
Figure3G_invivo_CD4_0525_3
Mus muculus
(
NCBITaxon:10090
)
Image data
omero.gallery
omero
zallery
vizarr
Fluorescence images of the ERK activity of isolated CD4 thymocytes overlaid on the sliced thymic lobes