Summary of 34-Hayashi-CellDynSDSRM

SSBD:database
SSBD:database URL
Title
-
Description
-
Relase date
2017-10-03
Updated date
2018-11-15
License
CC BY-NC-SA
Kind
Image data based on Experiment
Number of Datasets
3 ( Image datasets: 3, Quantitative data datasets: 0 )
Size of Datasets
104.0 MB ( Image datasets: 104.0 MB, Quantitative data datasets: 0 bytes )

Organism(s)
C. l. familiaris
Strain(s)
MDCK
Gene symbol(s)
Lamp1, Rab11a
Protein name(s)
TOMM20
Protein tag(s)
EYFP, mEmelard, venus

Datatype
organelle dynamics
Molecular Function (MF)
Biological Process (BP)
-
Cellular Component (CC)
organelle
Biological Imaging Method
-
XYZ Scale
XY: 100 nanometer per slice, Z: NA
T scale
0.1 second for each time interval, 0.01 second for each time interval

Image Acquisition
Experiment type
TimeLapse
Microscope type
Other
Acquisition mode
StructuredIllumination
Contrast method
Fluorescence
Microscope model
Custom made microscope system based on IX81 (Olympus) with a disk-scannning unit IX2-DSU (Olympus), custom-made disk (DU-DSR-SP; Olympus) and laser illumination optics (Sapphire488HP; Coherent)
Detector model
ORCA FLASH 4.0 v2
Objective model
Olympus UPLSAPO60XO 60x/1.3 O
Filter set
Olympus NIBA filter set without excitation filter

Related paper(s)

Shinichi Hayashi, Yasushi Okada (2015) Ultrafast superresolution fluorescence imaging with spinning disk confocal microscope optics., Molecular biology of the cell, Volume 26, Number 9, pp. 1743-51

Published in 2015 May 1 (Electronic publication in Feb. 25, 2015, midnight )

(Abstract) Most current superresolution (SR) microscope techniques surpass the diffraction limit at the expense of temporal resolution, compromising their applications to live-cell imaging. Here we describe a new SR fluorescence microscope based on confocal microscope optics, which we name the spinning disk superresolution microscope (SDSRM). Theoretically, the SDSRM is equivalent to a structured illumination microscope (SIM) and achieves a spatial resolution of 120 nm, double that of the diffraction limit of wide-field fluorescence microscopy. However, the SDSRM is 10 times faster than a conventional SIM because SR signals are recovered by optical demodulation through the stripe pattern of the disk. Therefore a single SR image requires only a single averaged image through the rotating disk. On the basis of this theory, we modified a commercial spinning disk confocal microscope. The improved resolution around 120 nm was confirmed with biological samples. The rapid dynamics of micro-tubules, mitochondria, lysosomes, and endosomes were observed with temporal resolutions of 30-100 frames/s. Because our method requires only small optical modifications, it will enable an easy upgrade from an existing spinning disk confocal to a SR microscope for live-cell imaging.
(MeSH Terms)

Contact
Yasushi Okada , RIKEN , Quantitative Biology Center , Laboratory for Cell Polarity Regulation
Contributors
Shinichi Hayashi, Yasushi Okada


Dataset List of 34-Hayashi-CellDynSDSRM

#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
# 995
Datast ID Fig5_SDSRM
Dataset Kind Image data
Dataset Size 42.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 996
Datast ID Fig6_SDSRM
Dataset Kind Image data
Dataset Size 36.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data

# 997
Datast ID Fig8_SDSRM
Dataset Kind Image data
Dataset Size 26.0 MB
4D view
SSBD:OMERO
Download BDML
Download Image data