398-Hirashima-LungMorpho

Project

Title
Spatio-temporal activation of ERK during branching morphogenesis in lung
Description
Intricate branching patterns emerge in internal organs due to the recurrent occurrence of simple deformations in epithelial tissues. During murine lung development, epithelial cells in distal tips of the single tube require fibroblast growth factor (FGF) signals emanating from their surrounding mesenchyme to form repetitive tip bifurcations. However, it remains unknown how the cells employ FGF signaling to convert their behaviors to achieve the recursive branching processes. Here, the authors show a mechano-chemical regulatory system underlying lung branching morphogenesis, orchestrated by extracellular signal-regulated kinase (ERK) as a downstream driver of FGF signaling. They found that tissue-scale curvature regulated ERK activity in the lung epithelium using two-photon live cell imaging and mechanical perturbations. ERK activation occurs specifically in epithelial tissues exhibiting positive curvature, regardless of whether the change in curvature was attributable to morphogenesis or perturbations. Moreover, ERK activation accelerates actin polymerization preferentially at the apical side of cells, mechanically contributing to the extension of the apical membrane, culminating in a reduction of epithelial tissue curvature. These results indicate the existence of a negative feedback loop between tissue curvature and ERK activity that transcends spatial scales. Their mathematical model confirms that this regulatory mechanism is sufficient to generate the recursive branching processes. Taken together, they propose that ERK orchestrates a curvature feedback loop pivotal to the self-organized patterning of tissues. See GitHub for code and sample images of simulations from Fig6 onwards
License
CC BY
Released at
Oct. 20, 2025, midnight
Updated at
Funding
This work was supported by JST PRESTO grant JPMJPR1949, JSPS KA- KENHI 19H00993 and 21H05290, the Medical Research Support Center of Kyoto University, and the Mechanobiology Institute (MBI) at the National Uni- versity of Singapore funded through the National Research Foundation, Singapore and the Ministry of Education, Singapore under the Research Centre of Excellence program and by the Department of Physiology at the Na- tional University of Singapore.
# of image datasets
17

Papers

Papers
Paper information: Hirashima T and Matsuda M. ERK-mediated curvature feedback regulates branching morphogenesis in lung epithelial tissue. Curr Biol. 2024 Feb 26;34(4):683-696.e6.,
Pubmed ID: 38228149,
DOI: https://doi.org/10.1016/j.cub.2023.12.049,
URL: https://pubmed.ncbi.nlm.nih.gov/38228149/

Contacts

Contacts
Tsuyoshi Hirashima (Contact) , Mechanobiology Institute , National University of Singapore

Biosamples

Organisms
Mus musculus (NCBI:txid10090)
Strains
hyBRET-ERK-NES
hyBRET-ERK-NES
Slc:ICR
Cells
epithelial cell of lung (CL_0000082)
Cell lines

Ontologies

UBERON
lung epithelium (UBERON_0000115)
Anatomical entities
GO: Biological processes
signal transduction (GO:0007174)
signal transduction (GO:0007175)
signal transduction (GO:0007178)
signal transduction (GO:0007173)
signal transduction (GO:0007181)
signal transduction (GO:0007169)
signal transduction (GO:0007179)
lung lobe formation (GO:0060464)
signal transduction (GO:0007171)
signal transduction (GO:0007172)
signal transduction (GO:0007166)
signal transduction (GO:0007177)
signal transduction (GO:0007168)
signal transduction (GO:0007165)
signal transduction (GO:0007176)
signal transduction (GO:0007167)
signal transduction (GO:0007180)
GO: Cellular components
cytoskeleton (GO:0005856)
cytosol (GO:0005829)
GO: Molecular functions
structural constituent of cytoskeleton (GO:0005200)

Genetics

Gene names
Protein names
Fibroblast growth factor 1 (P61148)
Actin, cytoplasmic 1 (P60710)
Cadherin-1 (P09803)
Genetic methods
transgenic (EFO_0004020)
Protein tags
Yellow fluorescent protein from Aequorea (FBbi:00000439)
Probes
antibody, Alexa Fluor 647 (FBbi:00000401)
antibody, Alexa Fluor 488 (FBbi:00000401)
Oligo Primer
Genotype

Treatments

Reagent or Compound
Concentration
Fold Dilution
FGF1-Alexa488
100 nanogram per milliliter (UO_0000275)
500 nanogram per milliliter (UO_0000275)
500 nanogram per milliliter (UO_0000275)
PD0325901 (CHEBI:88249)
1 micromolar (UO_0000064)
500 nanogram per milliliter (UO_0000275)
500 nanogram per milliliter (UO_0000275)
500 nanogram per milliliter (UO_0000275)
PD0325901 (CHEBI:88249)
1 micromolar (UO_0000064)
PD0325901 (CHEBI:88249)
1 micromolar (UO_0000064)

Imaging Methods

Dimensions
1024x1024x136x4x1, 640x640x1x3x164, 800x800x1x3x5, 1024x1024x1x3x81, 1024x1024x1x2x68, 1024x1024x129x2x1, 800x800x1x3x18, 800x800x6x3x30, 800x800x1x2x68, 800x800x1x3x68, 800x800x1x3x17, 800x800x156x1x1, 640x640x28x3x127, 800x800x6x3x13, 800x800x1x3x120, 800x800x1x3x221,
X scales
0.251 micrometer, 0.382 micrometer, 0.331 micrometer, 0.397 micrometer, 0.294 micrometer, 0.636 micrometer, 0.374 micrometer, 0.497 micrometer, 0.53 micrometer,
Y scales
0.251 micrometer, 0.382 micrometer, 0.331 micrometer, 0.397 micrometer, 0.294 micrometer, 0.636 micrometer, 0.374 micrometer, 0.497 micrometer, 0.53 micrometer,
Z scales
0.346 micrometer, NA, 1 micrometer,
T scales
1 minute, NA, 7 minutes, 2 minutes, 5 minutes, 10 minutes,
Channels
2 channel, 1 channel, 4 channel, 3 channel,
Microscopy types
two-photon laser scanning microscopy (FBbi:00000254)
confocal microscopy (FBbi:00000251)
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Body
Leica TCS SP8
Model
Light source
Detector
Objective
20X objective lens (HC PL APO CS2, Leica)
Filter set
Dichroic
Body
LCV-MPE, Olympus
Model
Light source
Detector
Objective
XLPLN25XWMP2, Olympus
Filter set
Dichroic
Body
FV1200MPE-IX83, Olympus
Model
Light source
Detector
Objective
UPLSAPO30XS, Olympus
Filter set
Dichroic

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
Mus musculus (NCBI:txid10090)
1024x1024x129x2x1
516MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x221
897MB
zip
Mus musculus (NCBI:txid10090)
/ Fibroblast growth factor 1 (P61148)
800x800x1x3x120
466MB
zip
Mus musculus (NCBI:txid10090)
640x640x1x3x164
559MB
zip
Mus musculus (NCBI:txid10090)
640x640x28x3x127
9GB
zip
Mus musculus (NCBI:txid10090)
/ Cadherin-1 (P09803)
800x800x156x1x1
95MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x5
60MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x5
60MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x18
86MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x17
82MB
zip
Mus musculus (NCBI:txid10090)
800x800x6x3x13
1GB
zip
Mus musculus (NCBI:txid10090)
800x800x6x3x30
1GB
zip
Mus musculus (NCBI:txid10090)
/ Actin, cytoplasmic 1 (P60710)
1024x1024x136x4x1
1.1GB
zip
Mus musculus (NCBI:txid10090)
1024x1024x1x3x81
587MB
zip
Mus musculus (NCBI:txid10090)
/ Actin, cytoplasmic 1 (P60710)
1024x1024x1x2x68
395MB
zip
Mus musculus (NCBI:txid10090)
800x800x1x3x68
326MB
zip
Mus musculus (NCBI:txid10090)
/ Actin, cytoplasmic 1 (P60710)
800x800x1x2x68
220MB
zip