Dataset Fig2D_ERKact_FGF1

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Project

Project
398-Hirashima-LungMorpho
Title
Spatio-temporal activation of ERK during branching morphogenesis in lung
Description
Intricate branching patterns emerge in internal organs due to the recurrent occurrence of simple deformations in epithelial tissues. During murine lung development, epithelial cells in distal tips of the single tube require fibroblast growth factor (FGF) signals emanating from their surrounding mesenchyme to form repetitive tip bifurcations. However, it remains unknown how the cells employ FGF signaling to convert their behaviors to achieve the recursive branching processes. Here, the authors show a mechano-chemical regulatory system underlying lung branching morphogenesis, orchestrated by extracellular signal-regulated kinase (ERK) as a downstream driver of FGF signaling. They found that tissue-scale curvature regulated ERK activity in the lung epithelium using two-photon live cell imaging and mechanical perturbations. ERK activation occurs specifically in epithelial tissues exhibiting positive curvature, regardless of whether the change in curvature was attributable to morphogenesis or perturbations. Moreover, ERK activation accelerates actin polymerization preferentially at the apical side of cells, mechanically contributing to the extension of the apical membrane, culminating in a reduction of epithelial tissue curvature. These results indicate the existence of a negative feedback loop between tissue curvature and ERK activity that transcends spatial scales. Their mathematical model confirms that this regulatory mechanism is sufficient to generate the recursive branching processes. Taken together, they propose that ERK orchestrates a curvature feedback loop pivotal to the self-organized patterning of tissues. See GitHub for code and sample images of simulations from Fig6 onwards
License
CC BY
Funding
This work was supported by JST PRESTO grant JPMJPR1949, JSPS KA- KENHI 19H00993 and 21H05290, the Medical Research Support Center of Kyoto University, and the Mechanobiology Institute (MBI) at the National Uni- versity of Singapore funded through the National Research Foundation, Singapore and the Ministry of Education, Singapore under the Research Centre of Excellence program and by the Department of Physiology at the Na- tional University of Singapore.

Dataset

Title
Time-lapse images of ERK activity during the terminal bifurcation of an isolated lung epithelium treated with FGF1
Description
Time-lapse images of ERK activity during the terminal bifurcation of an isolated lung epithelium. The culture was treated with FGF1, and 4 hours after the recording was started. Channel1; bright field, Channel2; CFP, Channel3; YFP
License
CC BY
Submitted at
None
Released at
None
Updated at

Biosamples

Description
Murine lungs dissected at embryonic day 12.5 that ubiquitously expressed the cytoplasmic FRET biosensor for the ERK activity.
Organisms
Mus musculus (NCBI:txid10090)
Strains
hyBRET-ERK-NES hyBRET-ERK-NES
Cells
epithelial cell of lung (CL_0000082)
Cell lines
Intrinsic variables
The transgenic mice manifested the expression of hyBRET-ERK-NES, a FRET biosensor conjoined with the nuclear export signal (NES) sequence.
Extrinsic variables
The culture was treated with FGF1, and 4 hours after the recording was started.

Ontologies

UBERON
lung epithelium (UBERON_0000115)
Anatomical entities
MeSH: Lung, Epithelium
Gene ontology: Biological processes
lung lobe formation (GO:0060464) signal transduction (GO:0007169)
Gene ontology: Cellular components
cytosol (GO:0005829)
Gene ontology: Molecular functions

Genetics

Gene names
Protein names
Genetic methods
transgenic (EFO_0004020)
Protein tags
Yellow fluorescent protein from Aequorea (FBbi:00000439)
Probes
Oligo Primer
Genotype

Treatments

Reagent or Compound
Concentrations
500 nanogram per milliliter (UO_0000275)
FoldDilution

Imaging Methods

Dimensions
640x640x28x3x127
X scales
0.53 micrometer
Y scales
0.53 micrometer
Z scales
T scales
10 minutes
Channels
3 channel
Microscopy types
two-photon laser scanning microscopy (FBbi:00000254)
Detection methods
photodiode
Visualization methods
YFP CFP
Illumination methods
photodiode
Sources of contrast
Contrast enhancing methods
optical method
Resolution enhancing methods
Image parameters
Sample preparation methods
living tissue

Instruments

Body
LCV-MPE, Olympus
Model
Light source
Detector
Objective
XLPLN25XWMP2, Olympus
Filter set
Dichroic