SSBD:database

388-Okuno-CFinput

OMERO gallery,
OMERO index

Project

Title
Climbing fiber inputs to Purkinje cells in wild type mice and PTPdelta knockout mice
Description
License
CC BY
Released at
Nov. 26, 2025, midnight
Updated at
Funding
# of image datasets
85

Papers

Papers
Paper information: Yuto Okuno, Kazuto Sakoori, Kyoko Matsuyama, Miwako Yamasaki, Masahiko Watanabe, Kouichi Hashimoto, Takaki Watanabe, Masanobu Kano (2023) PTPdelta is a presynaptic organizer for the formation and maintenance of climbing fiber to Purkinje cell synapses in the developing cerebellum., Frontiers in molecular neuroscience, Volume 16, pp. 1206245,
Pubmed ID: 37426069,
PMCID: 10323364,
DOI: https://doi.org/10.3389/fnmol.2023.1206245,

Contacts

Contacts
Takaki Watanabe (Contact) , Department of Neurophysiology , The University of Tokyo
Masanobu Kano (Contact) , Graduate School of Medicine , The University of Tokyo
Yuto Okuno (Image dataset contributor)

Biosamples

Organisms
Mus musculus (NCBI:txid10090)
Strains
C57BL/6N, C57BL/6J, 129/SvJ
Cells
Cell lines
NA

Anatomical information

UBERON
Anatomical entities

Gene ontology

GO: Biological processes
GO: Cellular components
GO: Molecular functions

Molecular biological information

Gene names
Protein names
Genetic methods
Protein tags
Probes
Oligo Primer
Genotype

Reagent or Compound

Reagent or Compound
Concentration
Fold Dilution

Imaging information

Dimensions
X scales
0.18 micrometer, 0.06 micrometer, 0.31 micrometer, 0.09 micrometer, 0.12 micrometer, 0.047 micrometer, 0.26 micrometer,
Y scales
0.18 micrometer, 0.06 micrometer, 0.31 micrometer, 0.09 micrometer, 0.12 micrometer, 0.047 micrometer, 0.26 micrometer,
Z scales
0.48 micrometer, 0.5 micrometer, 0.61 micrometer,
T scales
NA,
Channels
,

Biological Imaging Methods Ontology

Microscopy types
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
Fig1M_WT1_Lobule1_1
Mus musculus (NCBI:txid10090)
37572635
Gallery, Index
zip
Fig1M_WT1_Lobule1_2
Mus musculus (NCBI:txid10090)
78188573
Gallery, Index
zip
Fig1M_WT1_Lobule3_1
Mus musculus (NCBI:txid10090)
79790109
Gallery, Index
zip
Fig1M_WT1_Lobule3_2
Mus musculus (NCBI:txid10090)
95064093
Gallery, Index
zip
Fig1M_WT1_Lobule9_1
Mus musculus (NCBI:txid10090)
93679645
Gallery, Index
zip
Fig1M_WT1_Lobule9_2
Mus musculus (NCBI:txid10090)
85450781
Gallery, Index
zip
Fig1M_WT1_Lobule9_3
Mus musculus (NCBI:txid10090)
91422749
Gallery, Index
zip
Fig1M_WT1_Lobule9_4
Mus musculus (NCBI:txid10090)
98205725
Gallery, Index
zip
Fig1M_WT2_Lobule1_1
Mus musculus (NCBI:txid10090)
82259997
Gallery, Index
zip
Fig1M_WT2_Lobule1_2
Mus musculus (NCBI:txid10090)
96751645
Gallery, Index
zip
Fig1M_WT2_Lobule3_1
Mus musculus (NCBI:txid10090)
71323677
Gallery, Index
zip
Fig1M_WT2_Lobule3_2
Mus musculus (NCBI:txid10090)
81981469
Gallery, Index
zip
Fig1M_WT2_Lobule9_1
Mus musculus (NCBI:txid10090)
73478173
Gallery, Index
zip
Fig1M_WT2_Lobule9_2
Mus musculus (NCBI:txid10090)
86790173
Gallery, Index
zip
Fig1M_WT2_Lobule9_3
Mus musculus (NCBI:txid10090)
86466589
Gallery, Index
zip
Fig1M_WT2_Lobule9_4
Mus musculus (NCBI:txid10090)
97476637
Gallery, Index
zip
Fig1M_WT3_Lobule1_1
Mus musculus (NCBI:txid10090)
85291037
Gallery, Index
zip
Fig1M_WT3_Lobule1_2
Mus musculus (NCBI:txid10090)
83132445
Gallery, Index
zip
Fig1M_WT3_Lobule3_1
Mus musculus (NCBI:txid10090)
89788445
Gallery, Index
zip
Fig1M_WT3_Lobule3_2
Mus musculus (NCBI:txid10090)
82984989
Gallery, Index
zip
Fig1M_WT3_Lobule9_1
Mus musculus (NCBI:txid10090)
79593499
Gallery, Index
zip
Fig1M_WT3_Lobule9_2
Mus musculus (NCBI:txid10090)
67641373
Gallery, Index
zip
Fig1M_WT3_Lobule9_3
Mus musculus (NCBI:txid10090)
71389213
Gallery, Index
zip
Fig1M_WT3_Lobule9_4
Mus musculus (NCBI:txid10090)
71032861
Gallery, Index
zip
Fig1M_KO1_Lobule1_1
Mus musculus (NCBI:txid10090)
97140765
Gallery, Index
zip
Fig1M_KO1_Lobule1_2
Mus musculus (NCBI:txid10090)
103591965
Gallery, Index
zip
Fig1M_KO1_Lobule3_1
Mus musculus (NCBI:txid10090)
107765789
Gallery, Index
zip
Fig1M_KO1_Lobule3_2
Mus musculus (NCBI:txid10090)
96600093
Gallery, Index
zip
Fig1M_KO1_Lobule9_1
Mus musculus (NCBI:txid10090)
104607773
Gallery, Index
zip
Fig1M_KO1_Lobule9_2
Mus musculus (NCBI:txid10090)
97775645
Gallery, Index
zip
Fig1M_KO1_Lobule9_3
Mus musculus (NCBI:txid10090)
93806621
Gallery, Index
zip
Fig1M_KO1_Lobule9_4
Mus musculus (NCBI:txid10090)
78987293
Gallery, Index
zip
Fig1M_KO2_Lobule1_1
Mus musculus (NCBI:txid10090)
85581853
Gallery, Index
zip
Fig1M_KO2_Lobule1_2
Mus musculus (NCBI:txid10090)
90337309
Gallery, Index
zip
Fig1M_KO2_Lobule3_1
Mus musculus (NCBI:txid10090)
85528605
Gallery, Index
zip
Fig1M_KO2_Lobule3_2
Mus musculus (NCBI:txid10090)
81870877
Gallery, Index
zip
Fig1M_KO2_Lobule9_1
Mus musculus (NCBI:txid10090)
95354909
Gallery, Index
zip
Fig1M_KO2_Lobule9_2
Mus musculus (NCBI:txid10090)
94765085
Gallery, Index
zip
Fig1M_KO2_Lobule9_3
Mus musculus (NCBI:txid10090)
87654429
Gallery, Index
zip
Fig1M_KO2_Lobule9_4
Mus musculus (NCBI:txid10090)
89497629
Gallery, Index
zip
Fig1M_KO3_Lobule1_1
Mus musculus (NCBI:txid10090)
66011165
Gallery, Index
zip
Fig1M_KO3_Lobule1_2
Mus musculus (NCBI:txid10090)
83357725
Gallery, Index
zip
Fig1M_KO3_Lobule3_1
Mus musculus (NCBI:txid10090)
82100253
Gallery, Index
zip
Fig1M_KO3_Lobule3_2
Mus musculus (NCBI:txid10090)
82186269
Gallery, Index
zip
Fig1M_KO3_Lobule9_1
Mus musculus (NCBI:txid10090)
99741725
Gallery, Index
zip
Fig1M_KO3_Lobule9_2
Mus musculus (NCBI:txid10090)
105025565
Gallery, Index
zip
Fig1M_KO3_Lobule9_3
Mus musculus (NCBI:txid10090)
101470237
Gallery, Index
zip
Fig1M_KO3_Lobule9_4
Mus musculus (NCBI:txid10090)
98979869
Gallery, Index
zip
Fig1O_WT1_Lobule1_1
Mus musculus (NCBI:txid10090)
84828189
Gallery, Index
zip
Fig1O_WT1_Lobule1_2
Mus musculus (NCBI:txid10090)
103960605
Gallery, Index
zip
Fig1O_WT1_Lobule3_1
Mus musculus (NCBI:txid10090)
103473181
Gallery, Index
zip
Fig1O_WT1_Lobule3_2
Mus musculus (NCBI:txid10090)
106549277
Gallery, Index
zip
Fig1O_WT1_Lobule9_1
Mus musculus (NCBI:txid10090)
106909725
Gallery, Index
zip
Fig1O_WT1_Lobule9_2
Mus musculus (NCBI:txid10090)
106180637
Gallery, Index
zip
Fig1O_WT1_Lobule9_3
Mus musculus (NCBI:txid10090)
78274589
Gallery, Index
zip
Fig1O_WT1_Lobule9_4
Mus musculus (NCBI:txid10090)
92049437
Gallery, Index
zip
Fig1O_WT2_Lobule1_1
Mus musculus (NCBI:txid10090)
105844765
Gallery, Index
zip
Fig1O_WT2_Lobule1_2
Mus musculus (NCBI:txid10090)
91508765
Gallery, Index
zip
Fig1O_WT2_Lobule3_1
Mus musculus (NCBI:txid10090)
90972189
Gallery, Index
zip
Fig1O_WT2_Lobule3_2
Mus musculus (NCBI:txid10090)
101416989
Gallery, Index
zip
Fig1O_WT2_Lobule9_1
Mus musculus (NCBI:txid10090)
104362013
Gallery, Index
zip
Fig1O_WT2_Lobule9_2
Mus musculus (NCBI:txid10090)
102580253
Gallery, Index
zip
Fig1O_WT2_Lobule9_3
Mus musculus (NCBI:txid10090)
100745245
Gallery, Index
zip
Fig1O_WT2_Lobule9_4
Mus musculus (NCBI:txid10090)
110280733
Gallery, Index
zip
Fig1O_KO1_Lobule1_1
Mus musculus (NCBI:txid10090)
57786397
Gallery, Index
zip
Fig1O_KO1_Lobule1_2
Mus musculus (NCBI:txid10090)
104165405
Gallery, Index
zip
Fig1O_KO1_Lobule3_1
Mus musculus (NCBI:txid10090)
101220381
Gallery, Index
zip
Fig1O_KO1_Lobule3_2
Mus musculus (NCBI:txid10090)
102248477
Gallery, Index
zip
Fig1O_KO1_Lobule9_1
Mus musculus (NCBI:txid10090)
77058077
Gallery, Index
zip
Fig1O_KO1_Lobule9_2
Mus musculus (NCBI:txid10090)
85389341
Gallery, Index
zip
Fig1O_KO1_Lobule9_3
Mus musculus (NCBI:txid10090)
89174045
Gallery, Index
zip
Fig1O_KO1_Lobule9_4
Mus musculus (NCBI:txid10090)
86605853
Gallery, Index
zip
Fig1O_KO2_Lobule1_1
Mus musculus (NCBI:txid10090)
90861597
Gallery, Index
zip
Fig1O_KO2_Lobule1_2
Mus musculus (NCBI:txid10090)
90271773
Gallery, Index
zip
Fig1O_KO2_Lobule3_1
Mus musculus (NCBI:txid10090)
91627549
Gallery, Index
zip
Fig1O_KO2_Lobule3_2
Mus musculus (NCBI:txid10090)
91971613
Gallery, Index
zip
Fig1O_KO2_Lobule9_1
Mus musculus (NCBI:txid10090)
100872221
Gallery, Index
zip
Fig1O_KO2_Lobule9_2
Mus musculus (NCBI:txid10090)
110698525
Gallery, Index
zip
Fig1O_KO2_Lobule9_3
Mus musculus (NCBI:txid10090)
93794333
Gallery, Index
zip
Fig1O_KO2_Lobule9_4
Mus musculus (NCBI:txid10090)
81149981
Gallery, Index
zip
Fig2A_P0_Aldoc-Nega
Mus musculus (NCBI:txid10090)
27553826
Gallery, Index
zip
Fig2A_P6_Aldoc-Nega
Mus musculus (NCBI:txid10090)
45916194
Gallery, Index
zip
Fig2A_P6_Aldoc-Posi
Mus musculus (NCBI:txid10090)
60076066
Gallery, Index
zip
Fig2A_P18_Aldoc-Nega
Mus musculus (NCBI:txid10090)
85659682
Gallery, Index
zip
Fig2A_P18_Aldoc-Posi
Mus musculus (NCBI:txid10090)
54820898
Gallery, Index
zip