Dataset Fig1M_WT1_Lobule3_2

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Project

Project
388-Okuno-CFinput
Title
Climbing fiber inputs to Purkinje cells in wild type mice and PTPdelta knockout mice
Description
Functionally mature neural circuits are shaped during postnatal development by eliminating redundant synapses formed during the perinatal period. In the cerebellum of neonatal rodents, each Purkinje cell (PC) receives synaptic inputs from multiple (more than 4) climbing fibers (CFs). During the first 3 postnatal weeks, synaptic inputs from a single CF become markedly larger and those from the other CFs are eliminated in each PC, leading to mono-innervation of each PC by a strong CF in adulthood. While molecules involved in the strengthening and elimination of CF synapses during postnatal development are being elucidated, much less is known about the molecular mechanisms underlying CF synapse formation during the early postnatal period. The authors show experimental evidence that suggests that a synapse organizer, PTPdelta, is required for early postnatal CF synapse formation and the subsequent establishment of CF to PC synaptic wiring. They showed that PTPdelta was localized at CF-PC synapses from postnatal day 0 (P0) irrespective of the expression of Aldolase C (Aldoc), a major marker of PC that distinguishes the cerebellar compartments. They found that the extension of a single strong CF along PC dendrites (CF translocation) was impaired in global PTPdelta knockout (KO) mice from P12 to P29-31 predominantly in PCs that did not express Aldoc [Aldoc (–) PCs].
License
CC BY
Funding

Dataset

Title
Z-series images of synaptic inputs to the cerebellar lobule3 in wild type mouse
Description
Z-series images of synaptic inputs to the cerebellar lobule3 in wild type mouse. Aldoc is not expressed in the Purkinje cells at the cerebellar lobule3. Channel1; Car8, Channel2; Aldoc, Channel3; VGluT2
License
CC BY
Submitted at
None
Released at
None
Updated at

Biosamples

Description
Fixed brain slice from wild type P12 mouse
Organisms
Mus musculus (NCBI:txid10090)
Strains
C57BL/6N
Cells
neuron (CL_0000540) Purkinje cell (CL_0000121)
Cell lines
Intrinsic variables
Extrinsic variables

Ontologies

UBERON
brain (UBERON_0000955)
Anatomical entities
MeSH: Brain
Gene ontology: Biological processes
nervous system development (GO:0007399)
Gene ontology: Cellular components
synapse (GO:0045202) cell body (GO:0044297)
Gene ontology: Molecular functions

Genetics

Gene names
Protein names
Carbonic anhydrase-related protein (P28651) Fructose-bisphosphate aldolase C (P05063) Vesicular glutamate transporter 2 (Q8BLE7)
Genetic methods
Protein tags
Alexa Fluor 647 (FBbi:00000447)
Probes
antibody (FBbi:00000401)
Oligo Primer
Genotype

Treatments

Reagent or Compound
Concentrations
FoldDilution

Imaging Methods

Dimensions
1024x1024x20x3x1
X scales
0.18 micrometer
Y scales
0.18 micrometer
Z scales
0.61 micrometer
T scales
Channels
3 channel
Microscopy types
confocal microscopy (FBbi:00000251)
Detection methods
photomultiplier tube (PMT)
Visualization methods
primary antibody plus labeled secondary antibody
Illumination methods
photomultiplier tube (PMT)
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Image parameters
Sample preparation methods
fixation method

Instruments

Body
Olympus-Evident FV1200
Model
Light source
Detector
Objective
Olympus-Evident UPLSAPO40X
Filter set
Dichroic