Summary of 189-Kobayashi-NSCsDyn
Title
Confocal microscopy images of lysosomes situation in NSCs in both the DG and SVZ of mice.
Kind
Image data
based on Experiment
Number of Datasets
17
( Image datasets: 17,
Quantitative data datasets: 0 )
Size of Datasets
6.8 GB
( Image datasets: 6.8 GB,
Quantitative data datasets: 0 bytes )
Gene symbol(s)
CtsB, CtsL, Lamp1
Protein name(s)
GFAP, Nestin, TFEB, caTFEB
Protein tag(s)
GFP, mCherry
Molecular Function (MF)
-
Biological Process (BP)
cell division, negative regulation of lysosomal protein catabolic process
Cellular Component (CC)
lysosome, NA
Biological Imaging Method
confocal microscopy
X scale
0.0878588 micrometer/pixel, 0.9225176 micrometer/pixel, 0.0708494 micrometer/pixel, 0.1107021 micrometer/pixel, 0.922 micrometer/pixel, 0.4612588 micrometer/pixel, 0.0948875 micrometer/pixel, 0.472329 micrometer/pixel, 0.3936075 micrometer/pixel, 0.4612 micrometer/pixel, 0.0885617 micrometer/pixel, 0.3148860 micrometer/pixel, 0.5313701 micrometer/pixel, 0.6918882 micrometer/pixel, 0.4723290 micrometer/pixel
Y scale
0.0878588 micrometer/pixel, 0.9225176 micrometer/pixel, 0.0708494 micrometer/pixel, 0.1107021 micrometer/pixel, 0.922 micrometer/pixel, 0.4612588 micrometer/pixel, 0.0948875 micrometer/pixel, 0.472329 micrometer/pixel, 0.3936075 micrometer/pixel, 0.4612 micrometer/pixel, 0.0885617 micrometer/pixel, 0.3148860 micrometer/pixel, 0.5313701 micrometer/pixel, 0.6918882 micrometer/pixel, 0.4723290 micrometer/pixel
Z scale
1.6 micrometer/slice, 2.4 micrometer/slice, 1 micrometer/slice
T scale
10 minutes per time interval, NA
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Related paper(s)
Taeko Kobayashi, Wenhui Piao, Toshiya Takamura, Hiroshi Kori, Hitoshi Miyachi, Satsuki Kitano, Yumiko Iwamoto, Mayumi Yamada, Itaru Imayoshi, Seiji Shioda, Andrea Ballabio, Ryoichiro Kageyama (2019) Enhanced lysosomal degradation maintains the quiescent state of neural stem cells., Nature communications, Volume 10, Number 1, pp. 5446
Published in 2019 Nov 29
(Electronic publication in Nov. 29, 2019, midnight )
(Abstract) Quiescence is important for sustaining neural stem cells (NSCs) in the adult brain over the lifespan. Lysosomes are digestive organelles that degrade membrane receptors after they undergo endolysosomal membrane trafficking. Enlarged lysosomes are present in quiescent NSCs (qNSCs) in the subventricular zone of the mouse brain, but it remains largely unknown how lysosomal function is involved in the quiescence. Here we show that qNSCs exhibit higher lysosomal activity and degrade activated EGF receptor by endolysosomal degradation more rapidly than proliferating NSCs. Chemical inhibition of lysosomal degradation in qNSCs prevents degradation of signaling receptors resulting in exit from quiescence. Furthermore, conditional knockout of TFEB, a lysosomal master regulator, delays NSCs quiescence in vitro and increases NSC proliferation in the dentate gyrus of mice. Taken together, our results demonstrate that enhanced lysosomal degradation is an important regulator of qNSC maintenance.
(MeSH Terms)
Contact
Taeko Kobayashi, Ryoichiro Kageyama
, Kyoto University, Kyoto University
, Institute for Frontier Life and Medical Sciences, Institute for Frontier Life and Medical Sciences
SSBD:OMERO.gallery Project
SSBD:OMERO Project
Dataset List of 189-Kobayashi-NSCsDyn
#
Dataset ID
Kind
Size
4D View
SSBD:OMERO
Download BDML
Download Images
Dataset Kind
Image data
Dataset Size
8.2 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (6.5 MB)
Dataset Kind
Image data
Dataset Size
64.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (51.5 MB)
Dataset Kind
Image data
Dataset Size
328.5 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (260.8 MB)
Dataset Kind
Image data
Dataset Size
15.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (13.6 MB)
Dataset Kind
Image data
Dataset Size
75.3 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (62.3 MB)
Dataset Kind
Image data
Dataset Size
262.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (211.9 MB)
Dataset Kind
Image data
Dataset Size
15.7 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (12.8 MB)
Dataset Kind
Image data
Dataset Size
94.0 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (74.6 MB)
Dataset Kind
Image data
Dataset Size
262.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (205.6 MB)
Dataset Kind
Image data
Dataset Size
15.8 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (13.4 MB)
Dataset Kind
Image data
Dataset Size
94.1 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (74.2 MB)
Dataset Kind
Image data
Dataset Size
328.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (256.7 MB)
Dataset Kind
Image data
Dataset Size
5.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (4.6 MB)
Dataset Kind
Image data
Dataset Size
38.6 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (30.6 MB)
Dataset Kind
Image data
Dataset Size
144.4 MB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (105.6 MB)
Dataset Kind
Image data
Dataset Size
2.5 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (910.8 MB)
Dataset Kind
Image data
Dataset Size
2.5 GB
4D view
4D View
SSBD:OMERO
gallery
index
Download BDML
zip
Download Image data
zip (804.9 MB)