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Key
Organism
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Cell Line
Gene Symbol
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Detail of Figure3_train_11Embryos_GroundTruth
SSBD:OMERO.gallery Dataset
SSBD:OMERO Dataset
SSBD:OMERO.gallery Project
SSBD:OMERO Project
4D View for Quantitative Data
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Project
244-Tokuoka-Embryogenesis
SSBD:Repository
ssbd-repos-000244
Repository
https://bbbc.broadinstitute.org/BBBC050
Title
Time-series 3D images of early mouse embryos with nuclei fluorescently labeled with mRFP1 fused to the chromatin marker histone H2B
Description
Time-series 3D images of early mouse embryos with nuclei fluorescently labeled with mRFP1 fused to the chromatin marker histone H2B
Release, Updated
2023-02-02
License
CC BY
Kind
Image data
File Formats
uncompressed TIFF
Data size
193.9 MB
Organism
Mus musculus
(
NCBI:txid10090
)
Strain(s)
-
Cell Line
-
Protein names
H2B
Protein tags
mRFP1
Datatype
-
Molecular Function (MF)
Biological Process (BP)
embryo development (
GO:0009790
)
Cellular Component (CC)
nucleus (
GO:0005634
)
Biological Imaging Method
fluorescence microscopy (
Fbbi:00000246
)
IX71 microscope equipped with a 20x oil lens
X scale
0.8 micrometer/pixel
Y scale
0.8 micrometer/pixel
Z scale
1.75 micrometer/pixel
T scale
10 minutes of time interval
Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-
Summary of Methods
See details in Tokuoka Y, et. al. (2020) NPJ Syst Biol Appl, 2020 Oct 20;6(1):32.
Related paper(s)
Contact
Akira Funahashi , Keio University , Department of Biosciencesand Informatics
Contributors
Yuta Tokuoka
OMERO Dataset
https://ssbd.riken.jp/omero/webclient/?show=dataset-10302
OMERO Project
https://ssbd.riken.jp/omero/webclient/?show=project-851
Source
https://ssbd.riken.jp/data/244-Tokuoka-Embryogenesis/source/Figure3_train_11Embryos_GroundTruth.zip
(90.4 MB)