9-Masumoto-Transcriptome

Project

Title
Description
License
CC BY-SA
Released at
Oct. 3, 2014, midnight
Updated at
Funding
# of image datasets
8

Papers

Papers
Paper information: Koh-Hei Masumoto, Maki Ukai-Tadenuma, Takeya Kasukawa, Mamoru Nagano, Kenichiro D Uno, Kaori Tsujino, Kazumasa Horikawa, Yasufumi Shigeyoshi, Hiroki R Ueda (2010) Acute induction of Eya3 by late-night light stimulation triggers TSHbeta expression in photoperiodism., Current biology : CB, Volume 20, Number 24, pp. 2199-206,
Pubmed ID: 21129973,
DOI: https://doi.org/10.1016/j.cub.2010.11.038,

Contacts

Contacts
Hiroki Ueda (Contact) , Center for Developmental Biolog , RIKEN
Hiroki Ueda (Image dataset contributor)
Koh-hei Masumoto (Image dataset contributor)
Maki Ukai-Tadenuma (Image dataset contributor)
Takeya Kasukawa (Image dataset contributor)
Mamoru Nagano (Image dataset contributor)
Kenichiro Uno (Image dataset contributor)
Kaori Tsujino (Image dataset contributor)
Kazumasa Horikawa (Image dataset contributor)
Yasufumi Shigeyoshi (Image dataset contributor)

Biosamples

Organisms
Mus musculus (NCBI:txid10090)
Strains
NA
Cells
Cell lines

Anatomical information

UBERON
Anatomical entities

Gene ontology

GO: Biological processes
GO: Cellular components
GO: Molecular functions

Molecular biological information

Gene names
Protein names
Genetic methods
Protein tags
Probes
Oligo Primer
Genotype

Reagent or Compound

Reagent or Compound
Concentration
Fold Dilution

Imaging information

Dimensions
X scales
,
Y scales
,
Z scales
,
T scales
NA,
Channels
,

Biological Imaging Methods Ontology

Microscopy types
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
Mus musculus (NCBI:txid10090)
6355159
zip
Mus musculus (NCBI:txid10090)
6355515
zip
Mus musculus (NCBI:txid10090)
6355088
zip
Mus musculus (NCBI:txid10090)
6355144
zip
Mus musculus (NCBI:txid10090)
6355261
zip
Mus musculus (NCBI:txid10090)
6355329
zip
Mus musculus (NCBI:txid10090)
6354869
zip
Mus musculus (NCBI:txid10090)
6355433
zip