SSBD:database

30-Inomata-CellDyn

OMERO gallery,
OMERO index

Project

Title
Description
License
CC BY-NC-SA
Released at
Oct. 3, 2017, midnight
Updated at
Funding
# of image datasets
5

Papers

Papers
Paper information: Hidehiko Inomata, Tatsuo Shibata, Tomoko Haraguchi, Yoshiki Sasai (2013) Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann's organizer signals., Cell, Volume 153, Number 6, pp. 1296-311,
Pubmed ID: 23746842,
DOI: https://doi.org/10.1016/j.cell.2013.05.004,

Contacts

Contacts
Hidehiko Inomata (Contact) , Center for Developmental Biology , RIKEN
Hidehiko Inomata (Image dataset contributor)
Tatsuo Shibata (Image dataset contributor)
Tomoko Haraguchi (Image dataset contributor)
Yoshiki Sasai (Image dataset contributor)

Biosamples

Organisms
Xenopus laevis (NCBI:txid8355)
Strains
NA
Cells
Cell lines

Anatomical information

UBERON
Anatomical entities

Gene ontology

GO: Biological processes
GO: Cellular components
GO: Molecular functions

Molecular biological information

Gene names
Protein names
Genetic methods
Protein tags
Probes
Oligo Primer
Genotype

Reagent or Compound

Reagent or Compound
Concentration
Fold Dilution

Imaging information

Dimensions
X scales
,
Y scales
,
Z scales
,
T scales
0.97 second for each time interval,
Channels
,

Biological Imaging Methods Ontology

Microscopy types
Detection methods
Visualization methods
Illumination methods
Sources of contrast
Contrast enhancing methods
Resolution enhancing methods
Imaged parameters
Sample preparation methods

Instruments

Datasets

Dataset name
Organism
Gene / Protein
Dimensions
File size
SSBD:OMERO
Download
MovieS3-EG-Chd
Xenopus laevis (NCBI:txid8355)
304375406
Gallery, Index
zip
MovieS4-EG-Nog
Xenopus laevis (NCBI:txid8355)
244042578
Gallery, Index
zip
MovieS5-EG-Szl
Xenopus laevis (NCBI:txid8355)
283302946
Gallery, Index
zip
MovieS2-EG-TM
Xenopus laevis (NCBI:txid8355)
148579821
Gallery, Index
zip
MovieS1-EG
Xenopus laevis (NCBI:txid8355)
306510832
Gallery, Index
zip