Summary of ssbd-repos-00017

SSBD:database
URL

Name
ssbd-repos-00017 (17-Aoki-MolDyn)
URL
DOI
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Title
-
Description
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Submited Date
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Release Date
2016-10-03
Updated Date
2018-11-15
License
Funding information
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File formats
Data size
157.1 MB

Organism
R. norvegicus
Strain
NRK-52E
Cell Line
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Genes
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Proteins
ERK

GO Molecular Function (MF)
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GO Biological Process (BP)
cellular protein localization
GO Cellular Component (CC)
NA
Study Type
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Imaging Methods
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Method Summary
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Related paper(s)

Kazuhiro Aoki, Yuka Kumagai, Atsuro Sakurai, Naoki Komatsu, Yoshihisa Fujita, Clara Shionyu, Michiyuki Matsuda (2013) Stochastic ERK activation induced by noise and cell-to-cell propagation regulates cell density-dependent proliferation., Molecular cell, Volume 52, Number 4, pp. 529-40

Published in 2013 Nov 21 (Electronic publication in Oct. 17, 2013, midnight )

(Abstract) The extracellular signal-regulated kinase (ERK) plays a central role in the signaling cascades of cell growth. Here, we show that stochastic ERK activity pulses regulate cell proliferation rates in a cell density-dependent manner. A fluorescence resonance energy transfer (FRET) biosensor revealed that stochastic ERK activity pulses fired spontaneously or propagated from adjacent cells. Frequency, but not amplitude, of ERK activity pulses exhibited a bell-shaped response to the cell density and correlated with cell proliferation rates. Consistently, synthetic ERK activity pulses generated by a light-switchable CRaf protein accelerated cell proliferation. A mathematical model clarified that 80% and 20% of ERK activity pulses are generated by the noise and cell-to-cell propagation, respectively. Finally, RNA sequencing analysis of cells subjected to the synthetic ERK activity pulses suggested the involvement of serum responsive factor (SRF) transcription factors in the gene expression driven by the ERK activity pulses.
(MeSH Terms)

Contact(s)
Kazuhiro Aoki
Organization(s)
Kyoto University , Graduate School of Medicine , Imaging Platform for Spatio-Temporal Information
Image Data Contributors
Quantitative Data Contributors

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