Summary of ssbd-repos-00082

SSBD:database
URL

Name
ssbd-repos-00082 (82-Ikeda-GeneExp)
URL
DOI
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Title
Immunofluorescence images of different type neural progenitor cells (NPCs)
Description
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Submited Date
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Release Date
2018-11-14
Updated Date
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License
Funding information
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File formats
Data size
50.4 MB

Organism
M. musculus
Strain
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Cell Line
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Genes
Actb
Proteins
Mkl1

GO Molecular Function (MF)
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GO Biological Process (BP)
gene expression
GO Cellular Component (CC)
nucleus
Study Type
-
Imaging Methods
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Method Summary
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Related paper(s)

Takashi Ikeda, Takafusa Hikichi, Hisashi Miura, Hirofumi Shibata, Kanae Mitsunaga, Yosuke Yamada, Knut Woltjen, Kei Miyamoto, Ichiro Hiratani, Yasuhiro Yamada, Akitsu Hotta, Takuya Yamamoto, Keisuke Okita, Shinji Masui (2018) Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs., Nature communications, Volume 9, Number 1, pp. 1387

Published in 2018 Apr 11 (Electronic publication in April 11, 2018, midnight )

(Abstract) Multicellular organisms consist of multiple cell types. The identity of these cells is primarily maintained by cell-type-specific gene expression programs; however, mechanisms that suppress these programs are poorly defined. Here we show that serum response factor (Srf), a transcription factor that is activated by various extracellular stimuli, can repress cell-type-specific genes and promote cellular reprogramming to pluripotency. Manipulations that decrease beta-actin monomer quantity result in the nuclear accumulation of Mkl1 and the activation of Srf, which downregulate cell-type-specific genes and alter the epigenetics of regulatory regions and chromatin organization. Mice overexpressing Srf exhibit various pathologies including an ulcerative colitis-like symptom and a metaplasia-like phenotype in the pancreas. Our results demonstrate an unexpected function of Srf via a mechanism by which extracellular stimuli actively destabilize cell identity and suggest Srf involvement in a wide range of diseases.
(MeSH Terms)

Contact(s)
Takashi Ikeda, Keisuke Okita, Shinji Masui
Organization(s)
Kyoto University , Department of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA) , Okita Lab
Image Data Contributors
Quantitative Data Contributors

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