Summary of ssbd-repos-000159

SSBD:repository
SSBD:repository URL
DOI
Title
Time-lapse images of ERK activity in MDCK cells published in (2020, Boocock et al., Nat Phys)
Description

"Time-lapse images of ERK activity in MDCK cells published in (2020, Boocock et al., Nat Phys). Please see the ""readme.txt"" in each directory for the image conditions. For the experiment conditions, please see the papers (2020, Boocock et al., Nat Phys) and (2020, Hino et al., Dev Cell).

""Figure1-ERK_in_confluent"" includes the FRET/CFP images for the ERK activity in a confluent condition of MDCK cells.
""Figure2-ERK_Response_to_Stretch"" includes the FRET/CFP images for the ERK activity in response to the mechanical stretch of MDCK cells.
""Figure2-Optogenetic_ERK_Activation"" includes a boundary displacement of the cell clusters in response to the optogenetic ERK activation of MDCK cells.
""Figure3-ERK_TractionForce"" includes the FRET/CFP images for the ERK activity and beads images for the traction force calculation on a polyacrylamide gel.
""Figure4-ERK_Wildtype"" includes the FRET/CFP images for the ERK activity in the expansion assay of wildtype MDCK cells.
""Figure4-ERK_MerlinKO"" includes the FRET/CFP images for the ERK activity in the expansion assay of Merlin KO MDCK cells."

Submited Date
-
Release Date
2020-07-22
Updated Date
-
License
Data size
48.8 GB
Data formats
tif

Organism
Canis lupus familiaris
Strain
-
Cell Line
Madin-Darby canine kidney cells
Molecular Function (MF)
-
Biological Process (BP)
-
Cellular Component (CC)
-
Study Type
-
Imaging Methods
Widefield fluorescence microscope

Method Summary

See detail in Boocock et al. (2021) Nature Physics 17, 267-274

Related paper(s)

Boocock, Daniel, Hino, Naoya, Ruzickova, Natalia, Hirashima, Tsuyoshi, Hannezo, Edouard (2021) Theory of mechanochemical patterning and optimal migration in cell monolayers, Nature Physics, Volume 17, Number 2, 267-274

Published in Sept. 28, 2020

(Abstract) Collective cell migration offers a rich field of study for non-equilibrium physics and cellular biology, revealing phenomena such as glassy dynamics, pattern formation and active turbulence. However, how mechanical and chemical signalling are integrated at the cellular level to give rise to such collective behaviours remains unclear. We address this by focusing on the highly conserved phenomenon of spatiotemporal waves of density and extracellular signal-regulated kinase (ERK) activation, which appear both in vitro and in vivo during collective cell migration and wound healing. First, we propose a biophysical theory, backed by mechanical and optogenetic perturbation experiments, showing that patterns can be quantitatively explained by a mechanochemical coupling between active cellular tensions and the mechanosensitive ERK pathway. Next, we demonstrate how this biophysical mechanism can robustly induce long-ranged order and migration in a desired orientation, and we determine the theoretically optimal wavelength and period for inducing maximal migration towards free edges, which fits well with experimentally observed dynamics. We thereby provide a bridge between the biophysical origin of spatiotemporal instabilities and the design principles of robust and efficient long-ranged migration.

Contact(s)
Tsuyoshi Hirashima
Organization(s)
Kyoto University
Image Data Contributors
Tsuyoshi Hirashima, Edouard Hannezo, Naoya Hino, Daniel Boocock, Natalia Ruzickova
Quantitative Data Contributors

Download files