Summary of ssbd-repos-000330

Name
URL
DOI

Title
Dataset of actin nanocluster dynamics during Drosophila tracheal tubulogenesis
Description

The periodic circumferential cytoskeleton supports various tubular tissues. Radial expansion of the tube lumen causes anisotropic tensile stress, which can be exploited as a geometric cue. However, the molecular machinery linking anisotropy to robust circumferential patterning is poorly understood. Here, we aim to reveal the emergent process of circumferential actin cable formation in a Drosophila tracheal tube. During luminal expansion, sporadic actin nanoclusters emerge and exhibit circumferentially biased motion and fusion. RNAi screening reveals the formin family protein, DAAM, as an essential component responding to tissue anisotropy, and non-muscle myosin II as a component required for nanocluster fusion. An agent-based model simulation suggests that crosslinkers play a crucial role in nanocluster formation and cluster-to-cable transition occurs in response to mechanical anisotropy. Altogether, we propose that an actin nanocluster is an organizational unit that responds to stress in the cortical membrane and builds a higher-order cable structure.

Submited Date
2023-12-15
Release Date
2024-06-10
Updated Date
-
License
Funding information
-
File formats
tif, jpg, czi
Data size
10.1 GB

Organism
Drosophila melanogaster
Strain
w; btl-Gal4, UAS-lifeact::GFP, UAS-lifeact::mScarletx2, etc./ Drosphila melanogaster
Cell Line
NA
Genes
-
Proteins
-

GO Molecular Function (MF)
Cytoskeletal motor activity, actin binding
GO Biological Process (BP)
actin cytoskeleton organization, response to mechanical stimulus, tubular tissue development
GO Cellular Component (CC)
Actin, myosin II complex, actin crosslinker, formin
Study Type
Tubular tissue development, agent-based model, self-organization,
Imaging Methods
Confocal microscopy with Airyscan detector, time-lapse imaging

Method Summary

See details in Sekine et al., (2023) https://doi.org/10.21203/rs.3.rs-2747828/v1

Related paper(s)

Sayaka Sekine, Mitsusuke Tarama, Housei Wada, Mustafa M Sami, Tatsuo Shibata, Shigeo Hayashi (2024) Emergence of periodic circumferential actin cables from the anisotropic fusion of actin nanoclusters during tubulogenesis., Nature communications, Volume 15, Number 1, pp. 464

Published in 2024 Jan 24 (Electronic publication in Jan. 24, 2024, midnight )

(Abstract) The periodic circumferential cytoskeleton supports various tubular tissues. Radial expansion of the tube lumen causes anisotropic tensile stress, which can be exploited as a geometric cue. However, the molecular machinery linking anisotropy to robust circumferential patterning is poorly understood. Here, we aim to reveal the emergent process of circumferential actin cable formation in a Drosophila tracheal tube. During luminal expansion, sporadic actin nanoclusters emerge and exhibit circumferentially biased motion and fusion. RNAi screening reveals the formin family protein, DAAM, as an essential component responding to tissue anisotropy, and non-muscle myosin II as a component required for nanocluster fusion. An agent-based model simulation suggests that crosslinkers play a crucial role in nanocluster formation and cluster-to-cable transition occurs in response to mechanical anisotropy. Altogether, we propose that an actin nanocluster is an organizational unit that responds to stress in the cortical membrane and builds a higher-order cable structure.
(MeSH Terms)

Contact(s)
Sayaka Sekine
Organization(s)
Tohoku University, RIKEN BDR , Graduate School of Life Sciences , Laboratory for Histogenetic Dynamics
Image Data Contributors
Sayaka Sekine, Mitsusuke Tarama
Quantitative Data Contributors
Sayaka Sekine, Mitsusuke Tarama

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