Summary of ssbd-repos-000228

SSBD:database
URL

Name
ssbd-repos-000228 (228-Kanadome-CellInteration)
URL
DOI
-

Title
Time-lapse images of FRET‐based indicators dynamics in HEK293T cells or K562 cells.
Description
-
Submited Date
-
Release Date
2022-11-23
Updated Date
-
License
Funding information
-
File formats
Data size
1.1 GB

Organism
Homo sapiens
Strain
-
Cell Line
HEK293T, K562 cell, K562 cell
Genes
-
Proteins
-

GO Molecular Function (MF)
-
GO Biological Process (BP)
homophilic cell adhesion via plasma membrane adhesion molecules
GO Cellular Component (CC)
-
Study Type
-
Imaging Methods
time lapse microscopy, FRET

Method Summary
-
Related paper(s)

Takashi Kanadome, Natsumi Hoshino, Takeharu Nagai, Tomoki Matsuda, Takeshi Yagi (2021) Development of FRET-based indicators for visualizing homophilic trans interaction of a clustered protocadherin., Scientific reports, Volume 11, Number 1, pp. 22237

Published in 2021 Nov 15 (Electronic publication in Nov. 15, 2021, midnight )

(Abstract) Clustered protocadherins (Pcdhs), which are cell adhesion molecules, play a fundamental role in self-recognition and non-self-discrimination by conferring diversity on the cell surface. Although systematic cell-based aggregation assays provide information regarding the binding properties of Pcdhs, direct visualization of Pcdh trans interactions across cells remains challenging. Here, we present Forster resonance energy transfer (FRET)-based indicators for directly visualizing Pcdh trans interactions. We developed the indicators by individually inserting FRET donor and acceptor fluorescent proteins (FPs) into the ectodomain of Pcdh molecules. They enabled successful visualization of specific trans interactions of Pcdh and revealed that the Pcdh trans interaction is highly sensitive to changes in extracellular Ca(2+) levels. We expect that FRET-based indicators for visualizing Pcdh trans interactions will provide a new approach for investigating the roles of Pcdh in self-recognition and non-self-discrimination processes.
(MeSH Terms)

Contact(s)
Tomoki Matsuda, Takeshi Yagi
Organization(s)
Osaka University, Osaka University , Department of Biomolecular Science and Engineering , Graduate School of Frontier Biosciences , Laboratories for Integrated Biology,
Image Data Contributors
Quantitative Data Contributors

Download files
Download zipped files