Summary of ssbd-repos-000191

SSBD:database
URL

Name
ssbd-repos-000191 (191-Shima-KIF5Cmove)
URL
DOI
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Title
KIF5C running on various states of microtubules
Description
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Submited Date
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Release Date
2024-12-14
Updated Date
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License
Funding information
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File formats
Data size
1.6 GB

Organism
Strain
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Cell Line
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Genes
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Proteins
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GO Molecular Function (MF)
microtubule motor activity
GO Biological Process (BP)
microtubule-based transport, microtubule depolymerization, microtubule bundle maintenance
GO Cellular Component (CC)
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Study Type
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Imaging Methods
time lapse microscopy, evanescent wave microscopy

Method Summary
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Related paper(s)

Tomohiro Shima, Manatsu Morikawa, Junichi Kaneshiro, Taketoshi Kambara, Shinji Kamimura, Toshiki Yagi, Hiroyuki Iwamoto, Sotaro Uemura, Hideki Shigematsu, Mikako Shirouzu, Taro Ichimura, Tomonobu M Watanabe, Ryo Nitta, Yasushi Okada, Nobutaka Hirokawa (2018) Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport., The Journal of cell biology, Volume 217, Number 12, pp. 4164-4183

Published in 2018 Dec 3 (Electronic publication in Oct. 8, 2018, midnight )

(Abstract) Kinesin-1, the founding member of the kinesin superfamily of proteins, is known to use only a subset of microtubules for transport in living cells. This biased use of microtubules is proposed as the guidance cue for polarized transport in neurons, but the underlying mechanisms are still poorly understood. Here, we report that kinesin-1 binding changes the microtubule lattice and promotes further kinesin-1 binding. This high-affinity state requires the binding of kinesin-1 in the nucleotide-free state. Microtubules return to the initial low-affinity state by washing out the binding kinesin-1 or by the binding of non-hydrolyzable ATP analogue AMPPNP to kinesin-1. X-ray fiber diffraction, fluorescence speckle microscopy, and second-harmonic generation microscopy, as well as cryo-EM, collectively demonstrated that the binding of nucleotide-free kinesin-1 to GDP microtubules changes the conformation of the GDP microtubule to a conformation resembling the GTP microtubule.
(MeSH Terms)

Contact(s)
Yasushi Okada, Nobutaka Hirokawa
Organization(s)
RIKEN BDR, The University of Tokyo , Laboratory for Cell Polarity Regulation, Department of Cell Biology and Anatomy, Graduate School of Medicine , Laboratory for Cell Polarity Regulation, Department of Cell Biology and Anatomy, Graduate School of Medicine
Image Data Contributors
Quantitative Data Contributors

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