Adult Zebrafish Brain Gene Expression Database
File set name
Number of files
Gene symbol
Gene name
Synonym
Sex
Counter strain
Background density
Information and web viewer
Zip file download
4 vglut mix-M-CS-2022-04-05-1
2
vglut1a, vglut1b, vglut2a, vglut2b
vesicular glutamate transporter 1a, vesicular glutamate transporter 1b, vesicular glutamate transporter 2a, vesicular glutamate transporter 2b
Male
Methyl green
Low
4 vglut mix-M-CS-2022-04-05-2
2
vglut1a, vglut1b, vglut2a, vglut2b
vesicular glutamate transporter 1a, vesicular glutamate transporter 1b, vesicular glutamate transporter 2a, vesicular glutamate transporter 2b
Male
Methyl green
Low
4 vglut mix-M-noCS-2022-04-05-1
1
vglut1a, vglut1b, vglut2a, vglut2b
vesicular glutamate transporter 1a, vesicular glutamate transporter 1b, vesicular glutamate transporter 2a, vesicular glutamate transporter 2b
Male
N/A
Low
agrp-F-noCS-2016-02-04-1
1
agrp
agouti related neuropeptide
Female
N/A
Low
agrp-M-CS-2021-07-01-1
3
agrp
agouti related neuropeptide
Male
Methyl green
Low
agrp-M-CS-2022-07-14-1
1
agrp
agouti related neuropeptide
Male
Methyl green
Many particle background
agrp-M-noCS-2021-12-24-1
2
agrp
agouti related neuropeptide
Male
N/A
Low
agrp-M-noCS-2022-07-14-1
1
agrp
agouti related neuropeptide
Male
N/A
Many particle background
asip2b-F-noCS-2016-10-31-1
1
asip2b
agouti signaling protein 2b
agrp2
Female
N/A
Uneven dyeing
asip2b-M-CS-2017-02-05-1
1
asip2b
agouti signaling protein 2b
agrp2
Male
Methyl green
Low
asip2b-M-CS-2021-12-24-1
3
asip2b
agouti signaling protein 2b
agrp2
Male
Methyl green
Low
asip2b-M-CS-2022-03-01-1
1
asip2b
agouti signaling protein 2b
agrp2
Male
Methyl green
Low
asip2b-M-noCS-2017-02-10-1
1
asip2b
agouti signaling protein 2b
agrp2
Male
N/A
Low
asip2b-M-noCS-2021-12-24-1
4
asip2b
agouti signaling protein 2b
agrp2
Male
N/A
Low
avp-M-CS-2022-03-07-1
1
avp
arginine vasopressin
arginin vasotocin
Male
Methyl green
Low
avp-M-CS-2022-04-05-1
1
avp
arginine vasopressin
arginin vasotocin
Male
Methyl green
Low
avp-M-noCS-2022-04-22-1
1
avp
arginine vasopressin
arginin vasotocin
Male
N/A
Low
calca-F-noCS-2016-06-01-1
1
calca
calcitonin related polypeptide alpha
cgrp
Female
N/A
Low
calca-M-CS-2021-12-24-1
4
calca
calcitonin related polypeptide alpha
cgrp
Male
Methyl green
Low
calca-M-noCS-2016-05-31-1
1
calca
calcitonin related polypeptide alpha
cgrp
Male
N/A
Low
calca-M-noCS-2017-02-10-1
2
calca
calcitonin related polypeptide alpha
cgrp
Male
N/A
Low
cart2a-F-noCS-2023-02-16-1
2
cart2a
cocaine- and amphetamine-regulated transcript 2a
Female
N/A
Low
cart2a-M-CS-2022-03-01-1
2
cart2a
cocaine- and amphetamine-regulated transcript 2a
Male
Methyl green
Low
cart2a-M-CS-2022-04-06-1
1
cart2a
cocaine- and amphetamine-regulated transcript 2a
Male
Methyl green
Low
cart2a-M-noCS-2022-07-14-1
1
cart2a
cocaine- and amphetamine-regulated transcript 2a
Male
N/A
Many particle background
cart2a-M-noCS-2023-02-16-1
2
cart2a
cocaine- and amphetamine-regulated transcript 2a
Male
N/A
Low
cart2b-M-CS-2021-07-01-1
1
cart2b
cocaine- and amphetamine-regulated transcript 2b
cart1
Male
Methyl green
Low
cart2b-M-noCS-2021-07-02-1
1
cart2b
cocaine- and amphetamine-regulated transcript 2b
cart1
Male
N/A
Low
cart2b-M-noCS-2021-07-02-2
2
cart2b
cocaine- and amphetamine-regulated transcript 2b
cart1
Male
N/A
Low
cart3a-M-CS-2021-07-01-1
1
cart3a
cocaine- and amphetamine-regulated transcript 3a
cart3
Male
Methyl green
Low
cart3a-M-CS-2022-03-01-1
2
cart3a
cocaine- and amphetamine-regulated transcript 3a
cart3
Male
Methyl green
Low
cart3a-M-noCS-2021-07-02-1
2
cart3a
cocaine- and amphetamine-regulated transcript 3a
cart3
Male
N/A
Low
cart3b-F-noCS-2016-07-19-1
1
cart3b
cocaine- and amphetamine-regulated transcript 3b
cart2
Female
N/A
Low
cart3b-M-CS-2017-02-05-1
1
cart3b
cocaine- and amphetamine-regulated transcript 3b
cart2
Male
Methyl green
Low
cart3b-M-CS-2021-12-24-1
3
cart3b
cocaine- and amphetamine-regulated transcript 3b
cart2
Male
Methyl green
Low
cart3b-M-noCS-2016-07-19-1
1
cart3b
cocaine- and amphetamine-regulated transcript 3b
cart2
Male
N/A
Low
cart3b-M-noCS-2017-02-10-1
1
cart3b
cocaine- and amphetamine-regulated transcript 3b
cart2
Male
N/A
Low
cart4-F-noCS-2023-02-16-1
2
cart4
cocaine- and amphetamine-regulated transcript 4
cartl
Female
N/A
Low
cart4-M-CS-2022-03-01-1
2
cart4
cocaine- and amphetamine-regulated transcript 4
cartl
Male
Methyl green
Low
cart4-M-CS-2022-04-06-1
1
cart4
cocaine- and amphetamine-regulated transcript 4
cartl
Male
Methyl green
Low
cart4-M-noCS-2022-04-22-1
2
cart4
cocaine- and amphetamine-regulated transcript 4
cartl
Male
N/A
Many particle background
cart4-M-noCS-2023-02-16-1
2
cart4
cocaine- and amphetamine-regulated transcript 4
cartl
Male
N/A
Low
cart5-M-CS-2017-02-05-1
1
cart5
cocaine- and amphetamine-regulated transcript 5
cart4
Male
Methyl green
Low
cart5-M-noCS-2017-02-10-1
1
cart5
cocaine- and amphetamine-regulated transcript 5
cart4
Male
N/A
Low
cart5-M-noCS-2017-02-10-2
1
cart5
cocaine- and amphetamine-regulated transcript 5
cart4
Male
N/A
Low
ccka-F-noCS-2016-10-31-1
1
ccka
cholecystokinin a
Female
N/A
Low
ccka-M-CS-2017-02-05-1
1
ccka
cholecystokinin a
Male
Methyl green
Low
ccka-M-CS-2021-07-01-1
1
ccka
cholecystokinin a
Male
Methyl green
Low
ccka-M-noCS-2017-02-10-1
1
ccka
cholecystokinin a
Male
N/A
Low
cckb-F-noCS-2016-03-11-1
1
cckb
cholecystokinin b
Female
N/A
Low
cckb-M-CS-2017-02-04-1
1
cckb
cholecystokinin b
Male
Methyl green
Low
cckb-M-noCS-2017-02-10-1
1
cckb
cholecystokinin b
Male
N/A
Low
cckb-M-noCS-2023-02-16-1
2
cckb
cholecystokinin b
Male
N/A
Low
crha-M-CS-2021-12-24-1
3
crha
corticotropin-releasing hormone a
Male
Methyl green
Low
crha-M-noCS-2021-12-24-1
4
crha
corticotropin-releasing hormone a
Male
N/A
Low
crha-M-noCS-2021-12-24-2
3
crha
corticotropin-releasing hormone a
Male
N/A
Low
crhb-F-noCS-2016-07-20-1
1
crhb
corticotropin-releasing hormone b
Female
N/A
Low
crhb-M-CS-2017-02-24-1
1
crhb
corticotropin-releasing hormone b
Male
Methyl green
Low
crhb-M-CS-2022-04-05-1
2
crhb
corticotropin-releasing hormone b
Male
Methyl green
Low
crhb-M-noCS-2022-04-04-1
2
crhb
corticotropin-releasing hormone b
Male
N/A
Low
gad mix-M-CS-2021-07-01-1
1
gad1a, gad1b, gad2
glutamate decarboxylase 1a, glutamate decarboxylase 1b, glutamate decarboxylase 2
Male
Methyl green
Low
gad mix-M-CS-2021-12-24-1
2
gad1a, gad1b, gad2
glutamate decarboxylase 1a, glutamate decarboxylase 1b, glutamate decarboxylase 2
Male
Methyl green
Low
gad mix-M-noCS-2021-07-02-1
1
gad1a, gad1b, gad2
glutamate decarboxylase 1a, glutamate decarboxylase 1b, glutamate decarboxylase 2
Male
N/A
Low
gad mix-M-noCS-2021-07-02-2
1
gad1a, gad1b, gad2
glutamate decarboxylase 1a, glutamate decarboxylase 1b, glutamate decarboxylase 2
Male
N/A
Low
gal-F-noCS-2016-03-11-1
1
gal
galanin
Female
N/A
Low
gal-M-noCS-2016-03-11-1
1
gal
galanin
Male
N/A
Low
gal-M-noCS-2017-02-04-1
1
gal
galanin
Male
N/A
Low
gal-M-noCS-2017-02-10-1
1
gal
galanin
Male
N/A
Low
galp-F-noCS-2016-10-31-1
1
galp
galanin-like peptide
gall, si:rp71-1c10.8
Female
N/A
Low
galp-M-CS-2022-04-05-1
3
galp
galanin-like peptide
gall, si:rp71-1c10.8
Male
Methyl green
Low
galp-M-noCS-2022-04-05-1
1
galp
galanin-like peptide
gall, si:rp71-1c10.8
Male
N/A
Low
galp-M-noCS-2022-07-14-1
5
galp
galanin-like peptide
gall, si:rp71-1c10.8
Male
N/A
Low
gnrh2-M-CS-2022-04-05-1
1
gnrh2
gonadotoropin-releasing hormone 2
Male
Methyl green
Low
gnrh2-M-noCS-2021-12-24-1
2
gnrh2
gonadotoropin-releasing hormone 2
Male
N/A
Low
gnrh2-M-noCS-2022-04-05-1
1
gnrh2
gonadotoropin-releasing hormone 2
Male
N/A
Low
gnrh3-M-CS-2017-02-05-1
1
gnrh3
gonadotoropin-releasing hormone 3
Male
Methyl green
Low
gnrh3-M-CS-2022-04-05-1
1
gnrh3
gonadotoropin-releasing hormone 3
Male
Methyl green
Low
gnrh3-M-noCS-2021-12-24-1
2
gnrh3
gonadotoropin-releasing hormone 3
Male
N/A
Low
grp-F-noCS-2016-05-31-1
2
grp
gastrin-releasing peptide
Female
N/A
Low
grp-M-CS-2017-02-24-1
1
grp
gastrin-releasing peptide
Male
Methyl green
Low
grp-M-CS-2022-03-01-1
2
grp
gastrin-releasing peptide
Male
Methyl green
Low
grp-M-noCS-2016-05-31-1
2
grp
gastrin-releasing peptide
Male
N/A
Low
hcrt-F-noCS-2016-02-04-1
1
hcrt
hypocretin
orexin
Female
N/A
Low
hcrt-M-CS-2017-02-24-1
2
hcrt
hypocretin
orexin
Male
Methyl green
Low
hcrt-M-CS-2021-07-01-1
1
hcrt
hypocretin
orexin
Male
Methyl green
Low
hcrt-M-noCS-2017-02-24-1
2
hcrt
hypocretin
orexin
Male
N/A
Low
kiss1-F-noCS-2016-10-31-1
1
kiss1
kisspeptide 1
Female
N/A
Uneven dyeing
kiss1-M-CS-2017-02-05-1
1
kiss1
kisspeptide 1
Male
Methyl green
Low
kiss1-M-CS-2022-03-07-1
1
kiss1
kisspeptide 1
Male
Methyl green
Low
kiss1-M-noCS-2017-02-10-1
1
kiss1
kisspeptide 1
Male
N/A
Low
kiss2-M-CS-2017-02-24-1
2
kiss2
kisspeptide 2
Male
Methyl green
Low
kiss2-M-CS-2022-03-07-1
1
kiss2
kisspeptide 2
Male
Methyl green
Low
kiss2-M-noCS-2017-02-10-1
1
kiss2
kisspeptide 2
Male
N/A
Low
no probe-M-CS-2023-02-16-1
3
no probe
Male
Methyl green
Low
npb-F-noCS-2016-10-31-1
2
npb
neuropeptide b
Female
N/A
Uneven dyeing
npb-M-CS-2017-02-24-1
3
npb
neuropeptide b
Male
Methyl green
Low
npb-M-CS-2022-04-05-1
1
npb
neuropeptide b
Male
Methyl green
Low
npb-M-CS-2022-04-22-1
2
npb
neuropeptide b
Male
Methyl green
Low
npb-M-noCS-2017-03-03-1
2
npb
neuropeptide b
Male
N/A
Low
npvf-F-noCS-2016-07-19-1
1
npvf
neuropeptide VF
gnih
Female
N/A
Low
npvf-M-CS-2017-02-04-1
1
npvf
neuropeptide VF
gnih
Male
Methyl green
Low
npvf-M-noCS-2016-07-19-1
1
npvf
neuropeptide VF
gnih
Male
N/A
Low
npvf-M-noCS-2017-02-10-1
1
npvf
neuropeptide VF
gnih
Male
N/A
Low
npy-F-noCS-2016-07-19-1
1
npy
neuropeptide y
Female
N/A
Low
npy-M-CS-2021-07-01-1
1
npy
neuropeptide y
Male
Methyl green
Low
npy-M-CS-2021-12-24-1
3
npy
neuropeptide y
Male
Methyl green
Low
npy-M-noCS-2016-07-19-1
1
npy
neuropeptide y
Male
N/A
Low
npy-M-noCS-2017-02-10-1
1
npy
neuropeptide y
Male
N/A
Low
oxt-M-CS-2022-07-14-1
2
oxt
oxytocin
isotocin
Male
Methyl green
Low
oxt-M-noCS-2022-07-14-1
2
oxt
oxytocin
isotocin
Male
N/A
Low
oxt-M-noCS-2022-07-14-2
2
oxt
oxytocin
isotocin
Male
N/A
Low
pdyn-F-noCS-2016-03-11-1
1
pdyn
pro-dynorphin
Female
N/A
Low
pdyn-M-CS-2017-02-24-1
2
pdyn
pro-dynorphin
Male
Methyl green
Low
pdyn-M-CS-2021-12-24-1
3
pdyn
pro-dynorphin
Male
Methyl green
Low
pdyn-M-noCS-2017-03-03-1
1
pdyn
pro-dynorphin
Male
N/A
Low
penka-F-noCS-2016-07-19-1
1
penka
pro-enkephalin a
Female
N/A
Low
penka-M-CS-2017-02-24-1
2
penka
pro-enkephalin a
Male
Methyl green
Low
penka-M-CS-2021-07-01-1
1
penka
pro-enkephalin a
Male
Methyl green
Low
penka-M-noCS-2016-07-19-1
1
penka
pro-enkephalin a
Male
N/A
Low
penka-M-noCS-2017-02-10-1
1
penkb
pro-enkephalin b
Male
N/A
Low
penkb-F-noCS-2016-03-11-1
1
penkb
pro-enkephalin b
Female
N/A
Low
penkb-M-CS-2017-02-24-1
1
penkb
pro-enkephalin b
Male
Methyl green
Low
penkb-M-noCS-2016-03-11-1
1
penkb
pro-enkephalin b
Male
N/A
Low
penkb-M-noCS-2017-02-24-1
2
penkb
pro-enkephalin b
Male
N/A
Low
penkb-M-noCS-2017-02-24-2
2
penkb
pro-enkephalin b
Male
N/A
Low
pmch-F-noCS-2016-02-04-1
1
pmch
pro-melanin-concentrating hormone
pmch2
Female
N/A
Low
pmch-M-CS-2017-02-24-1
1
pmch
pro-melanin-concentrating hormone
pmch2
Male
Methyl green
Low
pmch-M-CS-2017-03-03-1
1
pmch
pro-melanin-concentrating hormone
pmch2
Male
Methyl green
Low
pmch-M-CS-2021-12-24-1
2
pmch
pro-melanin-concentrating hormone
pmch2
Male
Methyl green
Low
pmch-M-noCS-2016-02-04-1
1
pmch
pro-melanin-concentrating hormone
pmch2
Male
N/A
Low
pmch-M-noCS-2017-02-24-1
2
pmch
pro-melanin-concentrating hormone
pmch2
Male
N/A
Low
pmchl-F-noCS-2016-10-31-1
2
pmchl
pro-melanin-concentrating hormone, like
pmch1
Female
N/A
Low
pmchl-F-noCS-2023-02-16-1
3
pmchl
pro-melanin-concentrating hormone, like
pmch1
Female
N/A
Low
pmchl-M-CS-2017-02-24-1
2
pmchl
pro-melanin-concentrating hormone, like
pmch1
Male
Methyl green
Low
pmchl-M-noCS-2016-10-31-1
1
pmchl
pro-melanin-concentrating hormone, like
pmch1
Male
N/A
Uneven dyeing
pmchl-M-noCS-2017-02-24-1
2
pmchl
pro-melanin-concentrating hormone, like
pmch1
Male
N/A
Low
pomca-F-noCS-2016-07-19-1
1
pomca
pro-opiomelanocortin a
Female
N/A
Low
pomca-M-CS-2017-02-24-1
2
pomca
pro-opiomelanocortin a
Male
Methyl green
Low
pomca-M-CS-2021-07-01-1
1
pomca
pro-opiomelanocortin a
Male
Methyl green
Low
pomca-M-noCS-2016-07-20-1
1
pomca
pro-opiomelanocortin a
Male
N/A
Low
pomca-M-noCS-2017-03-03-1
1
pomca
pro-opiomelanocortin a
Male
N/A
Low
pomcb-F-noCS-2016-10-31-1
1
pomcb
pro-opiomelanocortin b
Female
N/A
Low
pomcb-M-CS-2017-02-24-1
2
pomcb
pro-opiomelanocortin b
Male
Methyl green
Low
pomcb-M-CS-2021-07-01-1
1
pomcb
pro-opiomelanocortin b
Male
Methyl green
Low
pomcb-M-noCS-2016-10-31-1
1
pomcb
pro-opiomelanocortin b
Male
N/A
Low
pomcb-M-noCS-2017-02-24-1
2
pomcb
pro-opiomelanocortin b
Male
N/A
Low
tac1-F-noCS-2016-03-11-1
1
tac1
tachykinin 1
Female
N/A
Low
tac1-M-CS-2017-03-03-1
2
tac1
tachykinin 1
Male
Methyl green
Low
tac1-M-noCS-2021-12-24-2
1
tac1
tachykinin 1
Male
N/A
Low
tac1-M-noCS-immumount-2021-12-24-1
2
tac1
tachykinin 1
Male
N/A
Low
tac3a-F-noCS-2016-03-11-1
1
tac3a
tachykinin 3a
Female
N/A
Low
tac3a-M-CS-2017-02-24-1
3
tac3a
tachykinin 3a
Male
Methyl green
Low
tac3a-M-noCS-2016-03-11-1
1
tac3a
tachykinin 3a
Male
N/A
Low
tac3a-M-noCS-2017-03-03-1
2
tac3a
tachykinin 3a
Male
N/A
Low
tac3b-F-noCS-2016-03-11-1
1
tac3b
tachykinin 3b
Female
N/A
Low
tac3b-M-CS-2017-02-24-1
3
tac3b
tachykinin 3b
Male
Methyl green
Low
tac3b-M-CS-2022-03-01-1
2
tac3b
tachykinin 3b
Male
Methyl green
Low
tac3b-M-noCS-2017-03-03-1
1
tac3b
tachykinin 3b
Male
N/A
Low
vglut1a-M-CS-2023-02-16-1
3
vglut1a
Male
Methyl green
Low
vglut2a-M-CS-2023-02-16-1
2
vglut2a
Male
Methyl green
Low
vglut2b-M-CS-2023-02-16-1
1
vglut2b
Male
Methyl green
Low
vipa-F-noCS-2016-05-31-1
1
vipa
vasoactive intestinal peptide a
Female
N/A
Low
vipa-M-CS-2017-02-24-1
2
vipa
vasoactive intestinal peptide a
Male
Methyl green
Low
vipa-M-CS-2022-03-07-1
4
vipa
vasoactive intestinal peptide a
Male
Methyl green
Low
vipa-M-noCS-2016-05-31-1
1
vipa
vasoactive intestinal peptide a
Male
N/A
Low
vipb-M-CS-2021-12-24-1
3
vipb
vasoactive intestinal peptide b
Male
Methyl green
Low
vipb-M-noCS-2017-03-03-1
2
vipb
vasoactive intestinal peptide b
Male
N/A
Low
vipb-M-noCS-2021-12-24-1
3
vipb
vasoactive intestinal peptide b
Male
N/A
Low