INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0036.tif']
INFO:segment:Functions ['adaptive_thres'] for 37 images.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0000.tif
INFO:segment:	frame 0: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0001.tif
INFO:segment:	frame 1: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0002.tif
INFO:segment:	frame 2: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0003.tif
INFO:segment:	frame 3: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0004.tif
INFO:segment:	frame 4: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0005.tif
INFO:segment:	frame 5: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0006.tif
INFO:segment:	frame 6: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0007.tif
INFO:segment:	frame 7: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0008.tif
INFO:segment:	frame 8: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0009.tif
INFO:segment:	frame 9: 150 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0010.tif
INFO:segment:	frame 10: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0011.tif
INFO:segment:	frame 11: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0012.tif
INFO:segment:	frame 12: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0013.tif
INFO:segment:	frame 13: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0014.tif
INFO:segment:	frame 14: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0015.tif
INFO:segment:	frame 15: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0016.tif
INFO:segment:	frame 16: 151 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0017.tif
INFO:segment:	frame 17: 152 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0018.tif
INFO:segment:	frame 18: 152 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0019.tif
INFO:segment:	frame 19: 152 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0020.tif
INFO:segment:	frame 20: 152 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0021.tif
INFO:segment:	frame 21: 152 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0022.tif
INFO:segment:	frame 22: 153 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0023.tif
INFO:segment:	frame 23: 154 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0024.tif
INFO:segment:	frame 24: 153 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0025.tif
INFO:segment:	frame 25: 154 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0026.tif
INFO:segment:	frame 26: 154 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0027.tif
INFO:segment:	frame 27: 155 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0028.tif
INFO:segment:	frame 28: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0029.tif
INFO:segment:	frame 29: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0030.tif
INFO:segment:	frame 30: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0031.tif
INFO:segment:	frame 31: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0032.tif
INFO:segment:	frame 32: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0033.tif
INFO:segment:	frame 33: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0034.tif
INFO:segment:	frame 34: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0035.tif
INFO:segment:	frame 35: 156 objects segmented.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/at/C1-iRFP-0036.tif
INFO:segment:	frame 36: 156 objects segmented.
INFO:__main__:Caller finished.
INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0036.tif']
INFO:subdetect:Functions ['propagate_multisnakes'] for 37 images.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0000.tif
INFO:subdetect:	frame 0 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0001.tif
INFO:subdetect:	frame 1 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0002.tif
INFO:subdetect:	frame 2 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0003.tif
INFO:subdetect:	frame 3 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0004.tif
INFO:subdetect:	frame 4 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0005.tif
INFO:subdetect:	frame 5 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0006.tif
INFO:subdetect:	frame 6 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0007.tif
INFO:subdetect:	frame 7 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0008.tif
INFO:subdetect:	frame 8 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0009.tif
INFO:subdetect:	frame 9 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0010.tif
INFO:subdetect:	frame 10 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0011.tif
INFO:subdetect:	frame 11 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0012.tif
INFO:subdetect:	frame 12 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0013.tif
INFO:subdetect:	frame 13 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0014.tif
INFO:subdetect:	frame 14 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0015.tif
INFO:subdetect:	frame 15 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0016.tif
INFO:subdetect:	frame 16 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0017.tif
INFO:subdetect:	frame 17 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0018.tif
INFO:subdetect:	frame 18 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0019.tif
INFO:subdetect:	frame 19 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0020.tif
INFO:subdetect:	frame 20 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0021.tif
INFO:subdetect:	frame 21 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0022.tif
INFO:subdetect:	frame 22 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0023.tif
INFO:subdetect:	frame 23 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0024.tif
INFO:subdetect:	frame 24 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0025.tif
INFO:subdetect:	frame 25 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0026.tif
INFO:subdetect:	frame 26 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0027.tif
INFO:subdetect:	frame 27 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0028.tif
INFO:subdetect:	frame 28 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0029.tif
INFO:subdetect:	frame 29 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0030.tif
INFO:subdetect:	frame 30 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0031.tif
INFO:subdetect:	frame 31 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0032.tif
INFO:subdetect:	frame 32 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0033.tif
INFO:subdetect:	frame 33 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0034.tif
INFO:subdetect:	frame 34 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0035.tif
INFO:subdetect:	frame 35 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/pm/C1-iRFP-0036.tif
INFO:subdetect:	frame 36 done.
INFO:__main__:Caller finished.
INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0036.tif']
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0000.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 30
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 0: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0001.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 21
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 1: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0002.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 98
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 2: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0003.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 10
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 3: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0004.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 19
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 4: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0005.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 10
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 5: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0006.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 6: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0007.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 9
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 7: 149 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0008.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 2
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 2
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 8: 149 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0009.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 9: 150 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0010.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 6
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 10: 151 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0011.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 2
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 11: 150 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0012.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 3
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 12: 150 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0013.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 2
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 13: 150 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0014.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 5
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 14: 150 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0015.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 11
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 15: 150 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0016.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 6
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 16: 150 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0017.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 8
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 17: 151 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0018.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 18: 151 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0019.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 19: 151 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0020.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 20: 151 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0021.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 16
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 2
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 2
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 2
INFO:track:	frame 21: 152 objects linked and 2 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0022.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 11
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 22: 152 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0023.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 2
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 2
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 23: 152 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0024.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 24: 153 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0025.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 5
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 25: 153 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0026.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 14
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 2
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 2
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 2
INFO:track:	frame 26: 152 objects linked and 2 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0027.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 6
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 2
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 2
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 27: 154 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0028.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 5
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 28: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0029.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 29: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0030.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 30: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0031.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 6
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 31: 155 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0032.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 2
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 32: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0033.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 5
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 33: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0034.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 7
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1
DEBUG:track:	track_neck_cut with {'THRES_ANGLE': 160, 'DISPLACEMENT': 20}: 1
DEBUG:track:	nearest_neighbor with {'DISPLACEMENT': 60, 'MASSTHRES': 0.5}: 1
INFO:track:	frame 34: 155 objects linked and 1 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0035.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 8
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 35: 155 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0036.tif
INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0036.tif']
INFO:postprocess:Postprocess.	collecting cells...
INFO:postprocess:	running gap_closing
INFO:postprocess:	running cut_short_traces
INFO:postprocess:	saving images...
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0000.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0001.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0002.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0003.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0004.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0005.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0006.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0007.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0008.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0009.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0010.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0011.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0012.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0013.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0014.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0015.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0016.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0017.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0018.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0019.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0020.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0021.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0022.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0023.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0024.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0025.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0026.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0027.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0028.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0029.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0030.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0031.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0032.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0033.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0034.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0035.tif
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/nuc/C1-iRFP-0036.tif
INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C2-RFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C2-RFP-0036.tif']
INFO:subdetect:Functions ['ring_dilation_above_offset_buffer'] for 37 images.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0000.tif
INFO:subdetect:	frame 0 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0001.tif
INFO:subdetect:	frame 1 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0002.tif
INFO:subdetect:	frame 2 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0003.tif
INFO:subdetect:	frame 3 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0004.tif
INFO:subdetect:	frame 4 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0005.tif
INFO:subdetect:	frame 5 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0006.tif
INFO:subdetect:	frame 6 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0007.tif
INFO:subdetect:	frame 7 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0008.tif
INFO:subdetect:	frame 8 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0009.tif
INFO:subdetect:	frame 9 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0010.tif
INFO:subdetect:	frame 10 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0011.tif
INFO:subdetect:	frame 11 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0012.tif
INFO:subdetect:	frame 12 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0013.tif
INFO:subdetect:	frame 13 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0014.tif
INFO:subdetect:	frame 14 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0015.tif
INFO:subdetect:	frame 15 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0016.tif
INFO:subdetect:	frame 16 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0017.tif
INFO:subdetect:	frame 17 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0018.tif
INFO:subdetect:	frame 18 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0019.tif
INFO:subdetect:	frame 19 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0020.tif
INFO:subdetect:	frame 20 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0021.tif
INFO:subdetect:	frame 21 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0022.tif
INFO:subdetect:	frame 22 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0023.tif
INFO:subdetect:	frame 23 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0024.tif
INFO:subdetect:	frame 24 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0025.tif
INFO:subdetect:	frame 25 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0026.tif
INFO:subdetect:	frame 26 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0027.tif
INFO:subdetect:	frame 27 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0028.tif
INFO:subdetect:	frame 28 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0029.tif
INFO:subdetect:	frame 29 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0030.tif
INFO:subdetect:	frame 30 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0031.tif
INFO:subdetect:	frame 31 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0032.tif
INFO:subdetect:	frame 32 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0033.tif
INFO:subdetect:	frame 33 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0034.tif
INFO:subdetect:	frame 34 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0035.tif
INFO:subdetect:	frame 35 done.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/cyto/C1-iRFP-0036.tif
INFO:subdetect:	frame 36 done.
INFO:__main__:[('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0000.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0001.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0002.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0003.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0004.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0005.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0006.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0007.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0008.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0009.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0010.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0011.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0012.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0013.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0014.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0015.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0016.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0017.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0018.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0019.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0020.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0021.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0022.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0023.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0024.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0025.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0026.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0027.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0028.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0029.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0030.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0031.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0032.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0033.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0034.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0035.tif',), ('data/20210208-PKAKTR1-bPAC-3/C2-RFP-0036.tif',)]
INFO:apply:Channel RFP: nuc applied...
INFO:apply:	making dataframe...
INFO:apply:Channel RFP: cyto applied...
INFO:apply:	making dataframe...
INFO:apply:	df.npz saved.
INFO:__main__:Caller finished.
INFO:__main__:['data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0000.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0001.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0002.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0003.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0004.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0005.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0006.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0007.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0008.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0009.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0010.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0011.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0012.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0013.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0014.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0015.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0016.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0017.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0018.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0019.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0020.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0021.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0022.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0023.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0024.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0025.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0026.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0027.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0028.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0029.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0030.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0031.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0032.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0033.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0034.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0035.tif', 'data/20210208-PKAKTR1-bPAC-3/C1-iRFP-0036.tif']
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0000.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 30
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 0: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0001.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 21
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 1: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0002.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 98
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 2: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0003.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 10
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 3: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0004.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 19
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 4: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0005.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 10
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 5: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0006.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 4
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 0
INFO:track:	frame 6: 149 objects linked and 0 unlinked.
DEBUG:utils.file_io:Image (shape (1024, 1024)) is saved at output/20210208-PKAKTR1-bPAC-3/tracked/C1-iRFP-0007.tif
DEBUG:track:	run_lap with {'DISPLACEMENT': 25, 'MASSTHRES': 0.25}: 9
DEBUG:track:	track_neck_cut with {'MASSTHRES': 1.0}: 1