421-Takenouchi-AgedYoungOocyte/Fig5G_Rec8Antibody_20230118-1-L16

Author reviewed
Time-lapse and z-series images of H2B-SNAP and tdTomato-CENPC in REC8 TRIM-Away oocytes treated with anti-REC8 antibody
Project
Dataset ID
Fig5G_Rec8Antibody_20230118-1-L16
Kind
Image data
Title
Time-lapse and z-series images of H2B-SNAP and tdTomato-CENPC in REC8 TRIM-Away oocytes treated with anti-REC8 antibody
Description
Time-lapse and z-series images of H2B-SNAP and tdTomato-CENPC in REC8 TRIM-Away oocytes treated with anti-REC8 antibody. By TRIM-Away method, Rec8 was knocked down by the antibody, and cohesin was partially depleted from the oocyte.
Folder Name
Fig5G_Rec8Antibody_20230118-1-L16
File Format
.tif
File Size
1.2GB
File Separation Method
-
Figure Number
Fig5G
Dimensions
256x256x17x3x200
X Scale
0.119 micrometer
Y Scale
0.119 micrometer
Z Scale
1.5 micrometer
T Scale
3 minutes
Channel
3 channel
Quantitative Data
-

Paper(s)

Biosample

Description
From prometaphase to anaphase oocyte from 7 to 9 week-old-mouse, in which chromosomes and kinetochores were visualized. For Rec8 TRIM-Away experiment, anti-REC8 antibody was injected.
Organism
Mus musculus (NCBITaxon:10090)
Strain
Cell
oocyte (CL:0000023)
Cell line
-
MeSH
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)
Intrinsic Variable
-
Extrinsic Variable
To visualize chromosomes and kinetochores, in vitro transcribed mRNAs for H2B-SNAP and tdTomato-CENPC (centromere protein C) were injected. For TRIM-Away method, 0.38 pg TRIM21 and 0.19 to 0.23 pg anti-REC8 antibody were injected.

Ontology

Anatomical Entity
-
UBERON
oocyte (CL:0000023)
Biological Process
female meiosis chromosome segregation, (GO:0016321)
Cellular Component
chromosome (GO:0005694)
Molecular Function
-
MeSH Anatomy
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)
MeSH BP
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)
MeSH CC
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)
MeSH MF
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)

Genetics

Gene
-
Protein / Probe
Histone H2B type 1-J
Method / Genotype
injection

Gene
-
Protein / Probe
Centromere protein C
Method / Genotype
injection

Treatments

No treatment records.

Imaging Method

Imaging Method
confocal microscopy (FBbi:00000251)
time lapse microscopy (FBbi:00000249)
Detection Method
photomultiplier tube (PMT)
Visualization Method
H2B with SNAP-tag was visuallised with SNAP-Cell 648-SiR. To visualize kinetochores, centromere protein C was tagged with tdTomato.
Illumination Method
single point scanning
Source of Contrast
distribution of a specific protein
Imaged Parameter
fluorescence emission
Sample Preparation Method
living tissue
MeSH
Oocytes (D009865)
Microscopy, Confocal (D018613)
Meiosis (D008540)
Chromosomes (D002875)
Chromosome Segregation (D020090)

Instrument

Body
Zeiss LSM780
Module
-
Light Source
-
Detector
-
Objective
Zeiss 40×C-Apochromat 1.2NA
Filter Set
-
Dichroic
-