Experimental Dataset for "Ensemble dynamics and information flow deduction from whole-brain imaging data" and "WormTensor: a clustering method for time-series whole-brain activity data from C. elegans”
Experimental Dataset for "Ensemble dynamics and information flow deduction from whole-brain imaging data" and "WormTensor: a clustering method for time-series whole-brain activity data from C. elegans”
Description
normalize1_withoutremove.zip is the time course of whole-brain activities of C. elegans for 28 animals used in Tsuyuzaki et al, "WormTensor: a clustering method for time-series whole-brain activity data from C. elegans” (BMC Bioinformatics, 2023, https://doi.org/10.1186/s12859-023-05230-2)
This dataset is superset of the data used in Toyoshima et al, "Ensemble dynamics and information flow deduction from whole-brain imaging data" (now in press at PLoS Comp Biol, https://doi.org/10.1371/journal.pcbi.1011848) or its preprint on bioRxiv 2022.11.18.517011 (https://doi.org/10.1101/2022.11.18.517011)
20221118freezed.7z is the dataset used in with TDE-RICA (https://github.com/YuToyoshima/TDE-RICA) and gKDR-GMM (https://github.com/yuichiiino1/gKDR-GMM).